Babushku, T., Lechner, M., Ehrenberg, S., Rambold, U., Schmidt-Supprian, M., Yates, A. J., Rane, S., Zimber-Strobl, U., & Strobl, L. J. (2024). Notch2 controls developmental fate choices between germinal center and marginal zone B cells upon immunization. Nature Communications, 15(1). https://doi.org/10.1038/s41467-024-46024-1

Walitt, B., Singh, K., LaMunion, S. R., Hallett, M., Jacobson, S., Chen, K., Enose-Akahata, Y., Apps, R., Barb, J. J., Bedard, P., Brychta, R. J., Buckley, A. W., Burbelo, P. D., Calco, B., Cathay, B., Chen, L., Chigurupati, S., Chen, J., … Cheung, F. (2024). Deep phenotyping of post-infectious myalgic encephalomyelitis/chronic fatigue syndrome. Nature Communications, 15(1). https://doi.org/10.1038/s41467-024-45107-3

Kim, J. S., Sun, Y., Balte, P., Cushman, M., Boyle, R., Tracy, R. P., Styer, L. M., Bell, T. D., Anderson, M. R., Allen, N. B., Schreiner, P. J., Bowler, R. P., Schwartz, D. A., Lee, J. S., Xanthakis, V., Doyle, M. F., Regan, E. A., Make, B. J., Kanaya, A. M., … Oelsner, E. C. (2024). Demographic and Clinical Factors Associated With SARS-CoV-2 Spike 1 Antibody Response Among Vaccinated US Adults: the C4R Study. Nature Communications, 15(1). https://doi.org/10.1038/s41467-024-45468-9

Cummings, M. J., Bakamutumaho, B., Lutwama, J. J., Owor, N., Che, X., Astorkia, M., Postler, T. S., Kayiwa, J., Kiconco, J., Muwanga, M., Nsereko, C., Rwamutwe, E., Nayiga, I., Kyebambe, S., Haumba, M., Bosa, H. K., Ocom, F., Watyaba, B., … Kikaire, B. (2024). COVID-19 immune signatures in Uganda persist in HIV co-infection and diverge by pandemic phase. Nature Communications, 15(1). https://doi.org/10.1038/s41467-024-45204-3

Xie, S. C., Wang, Y., Morton, C. J., Metcalfe, R. D., Dogovski, C., Pasaje, C. F. A., Dunn, E., Luth, M. R., Kumpornsin, K., Istvan, E. S., Park, J. S., Fairhurst, K. J., Ketprasit, N., Yeo, T., Yildirim, O., Bhebhe, M. N., Klug, D. M., Rutledge, P. J., Godoy, L. C., … Tilley, L. (2024). Reaction hijacking inhibition of Plasmodium falciparum asparagine tRNA synthetase. Nature Communications, 15(1). https://doi.org/10.1038/s41467-024-45224-z

Leung, Y. Y., Naj, A. C., Chou, Y.-F., Valladares, O., Schmidt, M., Hamilton-Nelson, K., Wheeler, N., Lin, H., Gangadharan, P., Qu, L., Clark, K., Kuzma, A. B., Lee, W.-P., Cantwell, L., Nicaretta, H., van der Lee, S., English, A., Kalra, D., … Muzny, D. (2024). Human whole-exome genotype data for Alzheimer’s disease. Nature Communications, 15(1). https://doi.org/10.1038/s41467-024-44781-7

Li, M., & Yang, G. (2024). A mesocortical glutamatergic pathway modulates neuropathic pain independent of dopamine co-release. Nature Communications, 15(1). https://doi.org/10.1038/s41467-024-45035-2

Gurbatri, C. R., Radford, G. A., Vrbanac, L., Im, J., Thomas, E. M., Coker, C., Taylor, S. R., Jang, Y., Sivan, A., Rhee, K., Saleh, A. A., Chien, T., Zandkarimi, F., Lia, I., Lannagan, T. R. M., Wang, T., Wright, J. A., Kobayashi, H., Ng, J. Q., … Danino, T. (2024). Engineering tumor-colonizing E. coli Nissle 1917 for detection and treatment of colorectal neoplasia. Nature Communications, 15(1). https://doi.org/10.1038/s41467-024-44776-4

Nunez, Y., Benavides, J., Shearston, J. A., Krieger, E. M., Daouda, M., Henneman, L. R. F., McDuffie, E. E., Goldsmith, J., Casey, J. A., & Kioumourtzoglou, M.-A. (2024). An environmental justice analysis of air pollution emissions in the United States from 1970 to 2010. Nature Communications, 15(1). https://doi.org/10.1038/s41467-023-43492-9

Yoo, D., Divard, G., Raynaud, M., Cohen, A., Mone, T. D., Rosenthal, J. T., Bentall, A. J., Stegall, M. D., Naesens, M., Zhang, H., Wang, C., Gueguen, J., Kamar, N., Bouquegneau, A., Batal, I., Coley, S. M., Gill, J. S., Oppenheimer, F., De Sousa-Amorim, E., … Loupy, A. (2024). A Machine Learning-Driven Virtual Biopsy System For Kidney Transplant Patients. Nature Communications, 15(1). https://doi.org/10.1038/s41467-023-44595-z

Ehsan, N., Kotis, B. M., Castel, S. E., Song, E. J., Mancuso, N., & Mohammadi, P. (2024). Haplotype-aware modeling of cis-regulatory effects highlights the gaps remaining in eQTL data. Nature Communications, 15(1). https://doi.org/10.1038/s41467-024-44710-8

Barilar, I., Battaglia, S., Borroni, E., Brandao, A. P., Brankin, A., Cabibbe, A. M., Carter, J., Chetty, D., Cirillo, D. M., Claxton, P., Clifton, D. A., Cohen, T., Coronel, J., Crook, D. W., Dreyer, V., Earle, S. G., Escuyer, V., Ferrazoli, L., … Zhu, B. (2024). Quantitative measurement of antibiotic resistance in Mycobacterium tuberculosis reveals genetic determinants of resistance and susceptibility in a target gene approach. Nature Communications, 15(1). https://doi.org/10.1038/s41467-023-44325-5

Gold, M. P., Ong, W., Masteller, A. M., Ghasemi, D. R., Galindo, J. A., Park, N. R., Huynh, N. C., Donde, A., Pister, V., Saurez, R. A., Vladoiu, M. C., Hwang, G. H., Eisemann, T., Donovan, L. K., Walker, A. D., Benetatos, J., Dufour, C., Garzia, L., Segal, R. A., … Fraenkel, E. (2024). Developmental basis of SHH medulloblastoma heterogeneity. Nature Communications, 15(1). https://doi.org/10.1038/s41467-023-44300-0

Pakula, H., Omar, M., Carelli, R., Pederzoli, F., Fanelli, G. N., Pannellini, T., Socciarelli, F., Van Emmenis, L., Rodrigues, S., Fidalgo-Ribeiro, C., Nuzzo, P. V., Brady, N. J., Dinalankara, W., Jere, M., Valencia, I., Saladino, C., Stone, J., Unkenholz, C., Garner, R., … Loda, M. (2024). Distinct mesenchymal cell states mediate prostate cancer progression. Nature Communications, 15(1). https://doi.org/10.1038/s41467-023-44210-1

Brown, K. L., Ramlall, V., Zietz, M., Gisladottir, U., & Tatonetti, N. P. (2024). Estimating the heritability of SARS-CoV-2 susceptibility and COVID-19 severity. Nature Communications, 15(1). https://doi.org/10.1038/s41467-023-44250-7

Wang, L., Hoang, A., Gil-Iturbe, E., Laganowsky, A., Quick, M., & Zhou, M. (2024). Mechanism of anion exchange and small-molecule inhibition of pendrin. Nature Communications, 15(1). https://doi.org/10.1038/s41467-023-44612-1

Gorman, J., Cheung, C. S.-F., Duan, Z., Ou, L., Wang, M., Chen, X., Cheng, C., Biju, A., Sun, Y., Wang, P., Yang, Y., Zhang, B., Boyington, J. C., Bylund, T., Charaf, S., Chen, S. J., Du, H., Henry, A. R., Liu, T., … Kwong, P. D. (2024). Cleavage-intermediate Lassa virus trimer elicits neutralizing responses, identifies neutralizing nanobodies, and reveals an apex-situated site-of-vulnerability. Nature Communications, 15(1). https://doi.org/10.1038/s41467-023-44534-y

Geng, A., Ganser, L., Roy, R., Shi, H., Pratihar, S., Case, D. A., & Al-Hashimi, H. M. (2023). An RNA excited conformational state at atomic resolution. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-43673-6

Altorki, N. K., Walsh, Z. H., Melms, J. C., Port, J. L., Lee, B. E., Nasar, A., Spinelli, C., Caprio, L., Rogava, M., Ho, P., Christos, P. J., Saxena, A., Elemento, O., Bhinder, B., Ager, C., Amin, A. D., Sanfilippo, N. J., Mittal, V., Borczuk, A. C., … McGraw, T. E. (2023). Neoadjuvant durvalumab plus radiation versus durvalumab alone in stages I–III non-small cell lung cancer: survival outcomes and molecular correlates of a randomized phase II trial. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-44195-x

Shu, E. G., Porter, J. R., Hauer, M. E., Sandoval Olascoaga, S., Gourevitch, J., Wilson, B., Pope, M., Melecio-Vazquez, D., & Kearns, E. (2023). Integrating climate change induced flood risk into future population projections. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-43493-8

Xiao, M., Kondo, S., Nomura, M., Kato, S., Nishimura, K., Zang, W., Zhang, Y., Akashi, T., Viny, A., Shigehiro, T., Ikawa, T., Yamazaki, H., Fukumoto, M., Tanaka, A., Hayashi, Y., Koike, Y., Aoyama, Y., Ito, H., Nishikawa, H., … Inoue, D. (2023). BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-44081-6

Reeves, D. B., Mayer, B. T., deCamp, A. C., Huang, Y., Zhang, B., Carpp, L. N., Magaret, C. A., Juraska, M., Gilbert, P. B., Montefiori, D. C., Bar, K. J., Cardozo-Ojeda, E. F., Schiffer, J. T., Rossenkhan, R., Edlefsen, P., Morris, L., Mkhize, N. N., Williamson, C., Mullins, J. I., … Edupuganti, S. (2023). High monoclonal neutralization titers reduced breakthrough HIV-1 viral loads in the Antibody Mediated Prevention trials. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-43384-y

Khan, A., Shang, N., Nestor, J. G., Weng, C., Hripcsak, G., Harris, P. C., Gharavi, A. G., & Kiryluk, K. (2023). Polygenic risk alters the penetrance of monogenic kidney disease. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-43878-9

Meir, A., Raina, V. B., Rivera, C. E., Marie, L., Symington, L. S., & Greene, E. C. (2023). The separation pin distinguishes the pro– and anti–recombinogenic functions of Saccharomyces cerevisiae Srs2. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-43918-4

Khan, K., Lustig, G., Römer, C., Reedoy, K., Jule, Z., Karim, F., Ganga, Y., Bernstein, M., Baig, Z., Jackson, L., Mahlangu, B., Mnguni, A., Nzimande, A., Stock, N., Kekana, D., Ntozini, B., van Deventer, C., Marshall, T., Manickchund, N., … Sigal, A. (2023). Evolution and neutralization escape of the SARS-CoV-2 BA.2.86 subvariant. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-43703-3

Manieri, E., Tie, G., Malagola, E., Seruggia, D., Madha, S., Maglieri, A., Huang, K., Fujiwara, Y., Zhang, K., Orkin, S. H., Wang, T. C., He, R., McCarthy, N., & Shivdasani, R. A. (2023). Role of PDGFRA+ cells and a CD55+ PDGFRALo fraction in the gastric mesenchymal niche. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-43619-y

Labouesse, M. A., Torres-Herraez, A., Chohan, M. O., Villarin, J. M., Greenwald, J., Sun, X., Zahran, M., Tang, A., Lam, S., Veenstra-VanderWeele, J., Lacefield, C. O., Bonaventura, J., Michaelides, M., Chan, C. S., Yizhar, O., & Kellendonk, C. (2023). A non-canonical striatopallidal Go pathway that supports motor control. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-42288-1

Baccarelli, A., Dolinoy, D. C., & Walker, C. L. (2023). A precision environmental health approach to prevention of human disease. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-37626-2

Hou, W., Ji, Z., Chen, Z., Wherry, E. J., Hicks, S. C., & Ji, H. (2023). A statistical framework for differential pseudotime analysis with multiple single-cell RNA-seq samples. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-42841-y

Rummell, B. P., Bikas, S., Babl, S. S., Gogos, J. A., & Sigurdsson, T. (2023). Altered corollary discharge signaling in the auditory cortex of a mouse model of schizophrenia predisposition. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-42964-2

Tsuji, M., Nair, M. S., Masuda, K., Castagna, C., Chong, Z., Darling, T. L., Seehra, K., Hwang, Y., Ribeiro, Á. L., Ferreira, G. M., Corredor, L., Coelho-dos-Reis, J. G. A., Tsuji, Y., Mori, M., Boon, A. C. M., Diamond, M. S., Huang, Y., & Ho, D. D. (2023). An immunostimulatory glycolipid that blocks SARS-CoV-2, RSV, and influenza infections in vivo. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-39738-1

Menolfi, D., Lee, B. J., Zhang, H., Jiang, W., Bowen, N. E., Wang, Y., Zhao, J., Holmes, A., Gershik, S., Rabadan, R., Kim, B., & Zha, S. (2023). ATR kinase supports normal proliferation in the early S phase by preventing replication resource exhaustion. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-39332-5

Irmady, K., Hale, C. R., Qadri, R., Fak, J., Simelane, S., Carroll, T., Przedborski, S., & Darnell, R. B. (2023). Blood transcriptomic signatures associated with molecular changes in the brain and clinical outcomes in Parkinson’s disease. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-39652-6

Schonhoff, A. M., Figge, D. A., Williams, G. P., Jurkuvenaite, A., Gallups, N. J., Childers, G. M., Webster, J. M., Standaert, D. G., Goldman, J. E., & Harms, A. S. (2023). Border-associated macrophages mediate the neuroinflammatory response in an alpha-synuclein model of Parkinson disease. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-39060-w

Rosenberg, A. M., Saggar, M., Monzel, A. S., Devine, J., Rogu, P., Limoges, A., Junker, A., Sandi, C., Mosharov, E. V., Dumitriu, D., Anacker, C., & Picard, M. (2023). Brain mitochondrial diversity and network organization predict anxiety-like behavior in male mice. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-39941-0

Zador, A., Escola, S., Richards, B., Ölveczky, B., Bengio, Y., Boahen, K., Botvinick, M., Chklovskii, D., Churchland, A., Clopath, C., DiCarlo, J., Ganguli, S., Hawkins, J., Körding, K., Koulakov, A., LeCun, Y., Lillicrap, T., Marblestone, A., Olshausen, B., … Tsao, D. (2023). Catalyzing next-generation Artificial Intelligence through NeuroAI. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-37180-x

Yang, H.-S., Teng, L., Kang, D., Menon, V., Ge, T., Finucane, H. K., Schultz, A. P., Properzi, M., Klein, H.-U., Chibnik, L. B., Schneider, J. A., Bennett, D. A., Hohman, T. J., Mayeux, R. P., Johnson, K. A., De Jager, P. L., & Sperling, R. A. (2023). Cell-type-specific Alzheimer’s disease polygenic risk scores are associated with distinct disease processes in Alzheimer’s disease. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-43132-2

Dmello, C., Zhao, J., Chen, L., Gould, A., Castro, B., Arrieta, V. A., Zhang, D. Y., Kim, K.-S., Kanojia, D., Zhang, P., Miska, J., Yeeravalli, R., Habashy, K., Saganty, R., Kang, S. J., Fares, J., Liu, C., Dunn, G., Bartom, E., … Sonabend, A. M. (2023). Checkpoint kinase 1/2 inhibition potentiates anti-tumoral immune response and sensitizes gliomas to immune checkpoint blockade. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-36878-2

Chen, X., Li, Y., Zhu, F., Xu, X., Estrella, B., Pazos, M. A., McGuire, J. T., Karagiannis, D., Sahu, V., Mustafokulov, M., Scuoppo, C., Sánchez-Rivera, F. J., Soto-Feliciano, Y. M., Pasqualucci, L., Ciccia, A., Amengual, J. E., & Lu, C. (2023). Context-defined cancer co-dependency mapping identifies a functional interplay between PRC2 and MLL-MEN1 complex in lymphoma. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-39990-5

Van, N. T., Zhang, K., Wigmore, R. M., Kennedy, A. I., DaSilva, C. R., Huang, J., Ambelil, M., Villagomez, J. H., O’Connor, G. J., Longman, R. S., Cao, M., Snook, A. E., Platten, M., Kasenty, G., Sigal, L. J., Prendergast, G. C., & Kim, S. V. (2023). Dietary L-Tryptophan consumption determines the number of colonic regulatory T cells and susceptibility to colitis via GPR15. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-43211-4

Upadhyayula, P. S., Higgins, D. M., Mela, A., Banu, M., Dovas, A., Zandkarimi, F., Patel, P., Mahajan, A., Humala, N., Nguyen, T. T. T., Chaudhary, K. R., Liao, L., Argenziano, M., Sudhakar, T., Sperring, C. P., Shapiro, B. L., Ahmed, E. R., Kinslow, C., Ye, L. F., … Canoll, P. (2023). Dietary restriction of cysteine and methionine sensitizes gliomas to ferroptosis and induces alterations in energetic metabolism. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-36630-w

Wang, J., Li, J., Kramer, S. T., Su, L., Chang, Y., Xu, C., Eadon, M. T., Kiryluk, K., Ma, Q., & Xu, D. (2023). Dimension-agnostic and granularity-based spatially variable gene identification using BSP. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-43256-5

Rassi, E., Zhang, Y., Mendoza, G., Méndez, J. C., Merchant, H., & Haegens, S. (2023). Distinct beta frequencies reflect categorical decisions. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-38675-3

Al-Zain, A. M., Nester, M. R., Ahmed, I., & Symington, L. S. (2023). Double-strand breaks induce inverted duplication chromosome rearrangements by a DNA polymerase δ-dependent mechanism. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-42640-5

Kurniansyah, N., Goodman, M. O., Khan, A. T., Wang, J., Feofanova, E., Bis, J. C., Wiggins, K. L., Huffman, J. E., Kelly, T., Elfassy, T., Guo, X., Palmas, W., Lin, H. J., Hwang, S.-J., Gao, Y., Young, K., Kinney, G. L., Smith, J. A., Yu, B., … Sofer, T. (2023). Evaluating the use of blood pressure polygenic risk scores across race/ethnic background groups. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-38990-9

Zhao, Q., Hu, J., Kong, L., Jiang, S., Tian, X., Wang, J., Hashizume, R., Jia, Z., Fowlkes, N. W., Yan, J., Xia, X., Yi, S. F., Dao, L. H., Masopust, D., Heimberger, A. B., & Li, S. (2023). FGL2-targeting T cells exhibit antitumor effects on glioblastoma and recruit tumor-specific brain-resident memory T cells. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-36430-2

Kitsak, M., Ganin, A., Elmokashfi, A., Cui, H., Eisenberg, D. A., Alderson, D. L., Korkin, D., & Linkov, I. (2023). Finding shortest and nearly shortest path nodes in large substantially incomplete networks by hyperbolic mapping. Nature Communications, 14(1). https://doi.org/10.1038/s41467-022-35181-w

Kümpornsin, K., Kochakarn, T., Yeo, T., Okombo, J., Luth, M. R., Hoshizaki, J., Rawat, M., Pearson, R. D., Schindler, K. A., Mok, S., Park, H., Uhlemann, A.-C., Jana, G. P., Maity, B. C., Laleu, B., Chenu, E., Duffy, J., Moliner Cubel, S., Franco, V., … Lee, M. C. S. (2023). Generation of a mutator parasite to drive resistome discovery in Plasmodium falciparum. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-38774-1

Son, J., Du, W., Esposito, M., Shariati, K., Ding, H., Kang, Y., & Accili, D. (2023). Genetic and pharmacologic inhibition of ALDH1A3 as a treatment of β-cell failure. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-36315-4

Ahuja, S. K., Manoharan, M. S., Lee, G. C., McKinnon, L. R., Meunier, J. A., Steri, M., Harper, N., Fiorillo, E., Smith, A. M., Restrepo, M. I., Branum, A. P., Bottomley, M. J., Orrù, V., Jimenez, F., Carrillo, A., Pandranki, L., Winter, C. A., Winter, L. A., … Gaitan, A. A. (2023). Immune resilience despite inflammatory stress promotes longevity and favorable health outcomes including resistance to infection. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-38238-6