Displaying 1 - 50 of 458CSV
Austin, G. I., Brown Kav, A., ElNaggar, S., Park, H., Biermann, J., Uhlemann, A.-C., Pe’er, I., & Korem, T. (2025). Processing-bias correction with DEBIAS-M improves cross-study generalization of microbiome-based prediction models. Nature Microbiology. https://doi.org/10.1038/s41564-025-01954-4
Publication Date
Chang, L.-C., Yin, M. T., Laird, G. M., Ritter, K. D., Shah, J. G., & Debnath, A. K. (2025). A First-in-Class Dual Degrader of Bcl-2/Bcl-xL Reverses HIV Latency and Minimizes Ex Vivo Reservoirs from Patients. International Journal of Molecular Sciences, 26(6), 2772. https://doi.org/10.3390/ijms26062772
Publication Date
Chellani, H. H., Human, K., Stanciu, R., Liu, A., Doucette, J., Agboglo, A., Qin, Y., Chern, T., Behnam, V., Blumenfeld, N., Victoriano, C. M., Ayers, A. G., Annavajhala, M. K., Begolo, S., Uhlemann, A., & Sia, S. K. (2025). Volumetric, Microfluidic Plasmonic RT‐PCR. Small Methods. Portico. https://doi.org/10.1002/smtd.202401988
Publication Date
Godinez-Macias, K. P., Chen, D., Wallis, J. L., Siegel, M. G., Adam, A., Bopp, S., Carolino, K., Coulson, L. B., Durst, G., Thathy, V., Esherick, L., Farringer, M. A., Flannery, E. L., Forte, B., Liu, T., Godoy Magalhaes, L., Gupta, A. K., Istvan, E. S., Jiang, T., … Winzeler, E. A. (2025). Revisiting the Plasmodium falciparum druggable genome using predicted structures and data mining. Npj Drug Discovery, 2(1). https://doi.org/10.1038/s44386-025-00006-5
Publication Date
Blair, N. J., Kopp, A., Kubin, C., Cotton, J., Yin, M. T., & Scherer, M. (2025). Association Between Inpatient Medication Treatment for Opioid Use Disorder and Reduced One-Year All-Cause Mortality in Patients With Invasive Bacterial Infections. Open Forum Infectious Diseases, 12(3). https://doi.org/10.1093/ofid/ofaf061
Publication Date
D’Avanzo, P. A., Bosco, J., Carnevale, C., & Zucker, J. (2024). A Qualitative Study of Doxycycline Postexposure Prophylaxis Knowledge, Attitudes, and Practices Among Health Care Providers in New York City. Sexually Transmitted Diseases, 52(4), 233–241. https://doi.org/10.1097/olq.0000000000002103
Publication Date
Park, J., Lindesmith, L. C., Olia, A. S., Costantini, V. P., Brewer-Jensen, P. D., Mallory, M. L., Kelley, C. E., Satterwhite, E., Longo, V., Tsybovsky, Y., Stephens, T., Marchioni, J., Martins, C. A., Huang, Y., Chaudhary, R., Zweigart, M., May, S. R., Reyes, Y., Flitter, B., … Baric, R. S. (2025). Broadly neutralizing antibodies targeting pandemic GII.4 variants or seven GII genotypes of human norovirus. Science Translational Medicine, 17(788). https://doi.org/10.1126/scitranslmed.ads8214
Publication Date
Hunt, B., Pham, A., Glick, N., Sam, S., Ni, K., Meyers, K., & Nguyen, N. (2025). A Universal Approach to Educating Patients with HIV about Long-Acting Injectable Treatment for HIV. AIDS and Behavior. https://doi.org/10.1007/s10461-024-04610-w
Publication Date
Lee, S. W., Huz, K., Gorelick, K., Li, J., Bina, T., Matsumura, S., Yin, N., Zhang, N., Anang, Y. N. A., Sachadava, S., Servin-DeMarrais, H. I., McMahon, D. J., Lu, H. H., Yin, M. T., & Wadhwa, S. (2025). Evaluation by dental professionals of an artificial intelligence-based application to measure alveolar bone loss. BMC Oral Health, 25(1). https://doi.org/10.1186/s12903-025-05677-0
Publication Date
Banougnin, B. H., Castor, D., Baluku, J. B., Dzumbunu, S. P., Somefun, O. D., Sene, W., Chipanta, D., & Hertzog, L. (2025). Social Protection and HIV risk Factors among Youth in Southern Africa: An Analysis of Cross-sectional Population-based HIV Impact Assessment Surveys. AIDS and Behavior. https://doi.org/10.1007/s10461-025-04638-6
Publication Date
CALÌ, F., PINSINO, A., LADANYI, A., MONDELLINI, G. M., LEE, C., SAYER, G. T., KAKU, Y., URIEL, N., TAKEDA, K., AARON, J. G., YUZEFPOLSKAYA, M., & COLOMBO, P. C. (2025). Influence of Environmental Temperature on the Occurrence of Driveline Infection in Patients With LVADs. Journal of Cardiac Failure. https://doi.org/10.1016/j.cardfail.2025.01.024
Publication Date
Schreidah, C. M., Jenkins, B. A., Trager, M. H., Husain, S., Coromilas, A. J., Dastidar, J. G., Miko, B. A., Zucker, J., & Gallitano, S. M. (2025). Atypical Mpox Cutaneous Presentation After Full Vaccination. The American Journal of Dermatopathology. https://doi.org/10.1097/dad.0000000000002945
Publication Date
Gengiah, T. N., Heck, C. J., Lewis, L., Mansoor, L. E., Harkoo, I., Myeni, N., Baum, M. M., Moss, J. A., Rooney, J. F., Hankins, C., Pozzetto, B., Abdool Karim, S. S., & Abdool Karim, Q. (2025). Acceptability of an annual tenofovir alafenamide implant for HIV prevention in South African women: findings from the CAPRISA 018 Phase I clinical trial. Journal of the International AIDS Society, 28(2). Portico. https://doi.org/10.1002/jia2.26426
Publication Date
Theodore, D. A., Neradilek, M., Gillespie, K., Edupuganti, S., Hinojosa, J. C., Lama, J. R., De La Grecca, R., Wu, Y. H., Davis, A., Mangini, D., Andrew, P., Marovich, M. A., Zwerski, S., Broder, G., Andrasik, M. P., Castor, D., Roxby, A. C., Cohen, M., Huang, Y., … Sobieszczyk, M. E. (2025). Brief Report: Associations Between Gender and Solicited Adverse Events After Passive Infusion of VRC01 or Placebo in HVTN 704/HPTN 085. JAIDS Journal of Acquired Immune Deficiency Syndromes, 98(4), 340–345. https://doi.org/10.1097/qai.0000000000003582
Publication Date
Aslam, S., Hussain, S., Haydel, B., Florman, S. S., Gilbert, A. J., Pereira, M. R., Elias, N., Hand, J., Mekeel, K., Schnickel, G., Shah, M., Ajmera, V., Tobian, A. A. R., Odim, J., Massie, A., Segev, D. L., Durand, C. M., & Rana, M. (2025). Breaking Barriers: Successful Outcomes of HCV D+/R- Transplants in HIV+ Recipients. American Journal of Transplantation. https://doi.org/10.1016/j.ajt.2025.02.007
Publication Date
Cascante Vega, J., Yaari, R., Robin, T., Wen, L., Zucker, J., Uhlemann, A.-C., Pei, S., & Shaman, J. (2025). Estimating nosocomial transmission of micro-organisms in hospital settings using patient records and culture data. Epidemics, 50, 100817. https://doi.org/10.1016/j.epidem.2025.100817
Publication Date
Joyce, M. G., Bu, W., Chen, W.-H., Gillespie, R. A., Andrews, S. F., Wheatley, A. K., Tsybovsky, Y., Jensen, J. L., Stephens, T., Prabhakaran, M., Fisher, B. E., Narpala, S. R., Bagchi, M., McDermott, A. B., Nabel, G. J., Kwong, P. D., Mascola, J. R., Cohen, J. I., & Kanekiyo, M. (2025). Structural basis for complement receptor engagement and virus neutralization through Epstein-Barr virus gp350. Immunity, 58(2), 295-308.e5. https://doi.org/10.1016/j.immuni.2025.01.010
Publication Date
Rawat, M., Padalino, G., Adika, E., Okombo, J., Yeo, T., Brancale, A., Fidock, D. A., Hoffmann, K. F., & Lee, M. C. S. (2025). Quinoxaline-based anti-schistosomal compounds have potent anti-plasmodial activity. PLOS Pathogens, 21(2), e1012216. https://doi.org/10.1371/journal.ppat.1012216
Publication Date
Villalba, M., Fix, G. M., Schenkel, R., Chiasson, M. A., Gifford, A. L., Gordon, P., Lekas, H.-M., Yin, M. T., & Baim-Lance, A. (2025). Exploring HIV provider framings of living and aging with HIV. SSM - Qualitative Research in Health, 7, 100526. https://doi.org/10.1016/j.ssmqr.2025.100526
Publication Date
Mezochow, A. K., Pereira, M. R., Ortega-Legaspi, J., & Lautenbach, E. (2025). P-2252. Bloodstream Infections in Heart Transplant Recipients Following the 2018 OPTN Heart Allocation Policy Change. Open Forum Infectious Diseases, 12(Supplement_1). https://doi.org/10.1093/ofid/ofae631.2405
Publication Date
Blair, N., Kopp, A., Kubin, C. J., Cotton, J., Yin, M., & Scherer, M. (2025). P-862. Hospital administered MOUD is associated with decreased one-year mortality among PWUD admitted with bloodstream infections. Open Forum Infectious Diseases, 12(Supplement_1). https://doi.org/10.1093/ofid/ofae631.1054
Publication Date
Hokunson, T. W., Hernandez, E., Annavajhala, M. K., Uhlemann, A.-C., & Gomez-Simmonds, A. (2025). P-1340. Genetic Factors Associated with Cefepime and Piperacillin/Tazobactam Resistance in Clinical Extended-Spectrum Beta-Lactamase-Producing Enterobacterales from the Intensive Care Unit. Open Forum Infectious Diseases, 12(Supplement_1). https://doi.org/10.1093/ofid/ofae631.1517
Publication Date
Metlay, J., Blair, N., Scherer, M., Kodali, K., Sethi, S., Parikh, S. A., Zilinyi, R., & Sobieszczyk, M. E. (2025). P-938. Percutaneous Mechanical Aspiration in Drug Use Associated-Infective Endocarditis. Open Forum Infectious Diseases, 12(Supplement_1). https://doi.org/10.1093/ofid/ofae631.1129
Publication Date
Leocadio, C., Garcia, E. A., Lash, M., Berardi, J., Chan, J., Chasan, R., Esquivel, B. C., Foote, M. K., Glesby, M. J., Guerra, A., Harris, A. B., Knutsen, D., Mannheimer, S., Mazo, D., McLean, J., McPherson, T. D., Meyerowitz, E., Mgbako, O., Patel, G., … Wong, M. (2025). 214. Clinical Characteristics and Outcomes of Patients Treated with Tecovirimat for Mpox Disease: A Large Cohort in New York City. Open Forum Infectious Diseases, 12(Supplement_1). https://doi.org/10.1093/ofid/ofae631.072
Publication Date
Garzia, C., Nelson, B., Loo, A., Demenagas, N., & Kubin, C. J. (2025). P-2309. Assessment of Risk Factors Associated with Subtherapeutic Posaconazole Levels. Open Forum Infectious Diseases, 12(Supplement_1). https://doi.org/10.1093/ofid/ofae631.2461
Publication Date
Rashidi, K., Kubin, C. J., Wu, G., Nelson, B., & Uhlemann, A.-C. (2025). P-1476. Cefiderocol Treatment Outcomes and Risk Factors for Gram-negative Bacterial Infection Treatment Failure. Open Forum Infectious Diseases, 12(Supplement_1). https://doi.org/10.1093/ofid/ofae631.1646
Publication Date
Parkinson, M., Saylor, M., Villarreal, J., Chaudhuri, S., Gunaratne, S., & Olender, S. (2025). P-1441. Demographic and Clinical Characteristics of New Migrant Patients with HIV in a New York City Open Access HIV Primary Care Clinic. Open Forum Infectious Diseases, 12(Supplement_1). https://doi.org/10.1093/ofid/ofae631.1614
Publication Date
Heck, C. J., Theodore, D. A., Autry, A., Sovic, B., Yang, C., Anderson-Burnett, S. A., Ray, C., Austin, E., Rotbert, J., Zucker, J., Catallozzi, M., Sobieszczyk, M. E., & Castor, D. (2025). Predictors, patterns, and correlates of moderate-severe psychological distress among New York City College Students during Waves 2–4 of COVID-19. Scientific Reports, 15(1). https://doi.org/10.1038/s41598-025-86364-6
Publication Date
Glance, L. G., Joynt Maddox, K. E., Stone, P. W., Shang, J., Furuya, E. Y., Chastain, A. M., Lee, J. W., Morse-Karzen, B., & Dick, A. W. (2025). COVID-19 Pandemic and Racial and Ethnic Disparities in Long-Term Nursing Home Stay or Death Following Hospital Discharge. JAMA Network Open, 8(1), e2456816. https://doi.org/10.1001/jamanetworkopen.2024.56816
Publication Date
Mason, R. D., Zhang, B., Morano, N. C., Shen, C.-H., McKee, K., Heimann, A., Du, R., Nazzari, A. F., Hodges, S., Kanai, T., Lin, B. C., Louder, M. K., Doria-Rose, N. A., Zhou, T., Shapiro, L., Roederer, M., Kwong, P. D., & Gorman, J. (2025). Structural development of the HIV-1 apex-directed PGT145-PGDM1400 antibody lineage. Cell Reports, 44(1), 115223. https://doi.org/10.1016/j.celrep.2024.115223
Publication Date
Park, H., Lynch, E., Tillman, A., Lewis, K., Jin, Z., Uhlemann, A.-C., Abrams, J. A., & Freedberg, D. E. (2025). A phase 2 randomized, placebo-controlled trial of inulin for the prevention of gut pathogen colonization and infection among patients admitted to the intensive care unit for sepsis. Critical Care, 29(1). https://doi.org/10.1186/s13054-024-05232-3
Publication Date
May, M. S., Park, H., Moallem, D. H., Seeram, D., Dajiang, S., Hibshoosh, H., Jamison, J. K., Uhlemann, A.-C., & Manji, G. A. (2024). Low Bacterial Biomass in Human Pancreatic Cancer and Adjacent Normal Tissue. International Journal of Molecular Sciences, 26(1), 140. https://doi.org/10.3390/ijms26010140
Publication Date
Dos Santos, F. C., Batey, D. S., Kay, E. S., Jia, H., Wood, O. R., Abua, J. A., Olender, S. A., & Schnall, R. (2025). The effect of a combined mHealth and community health worker intervention on HIV self-management. Journal of the American Medical Informatics Association. https://doi.org/10.1093/jamia/ocae322
Publication Date
Gorman, J., Du, R., Lai, Y.-T., Ahmadi, M. S., King, H. A. D., Song, K., Manalang, K., Gonelli, C. A., Schramm, C. A., Cheng, C., Nguyen, R., Ambrozak, D., Druz, A., Shen, C.-H., Yang, Y., Douek, D. C., Kwong, P. D., Roederer, M., & Mason, R. D. (2025). Isolation and structure of broad SIV-neutralizing antibodies reveal a proximal helical MPER epitope recognized by a rhesus multi-donor class. Cell Reports, 44(1), 115163. https://doi.org/10.1016/j.celrep.2024.115163
Publication Date
Hong, S. J., Resnick, S. J., Iketani, S., Cha, J. W., Albert, B. A., Fazekas, C. T., Chang, C.-W., Liu, H., Dagan, S., Abagyan, M. R., Fajtová, P., Culbertson, B., Brace, B., Reddem, E. R., Forouhar, F., Glickman, J. F., Balkovec, J. M., Stockwell, B. R., Shapiro, L., … Chavez, A. (2025). A multiplex method for rapidly identifying viral protease inhibitors. Molecular Systems Biology, 21(2), 158–172. https://doi.org/10.1038/s44320-024-00082-1
Publication Date
Snow, M. A., Annavajhala, M. K., Moscovitz, S. Z., Uhlemann, A.-C., & Debelenko, L. (2025). Placental Infection with Different SARS-CoV-2 Variants Leading to Stillbirth: Report of Two Cases. COVID, 5(1), 8. https://doi.org/10.3390/covid5010008
Publication Date

Gunaratne, S. H., Taylor, B. S., Zucker, J., Wilkin, T. J., & Tieu, H. V. (2024). CROI 2024: The Challenges of Sustained Viral Suppression, Advanced HIV Disease, and Ending the HIV Epidemic Targets. Topics in antiviral medicine, 32(4), 542–567.

Publication Date
Liu, H., Zask, A., Forouhar, F., Iketani, S., Williams, A., Vaz, D. R., Habashi, D., Choi, K., Resnick, S. J., Hong, S. J., Lovett, D. H., Bai, T., Chavez, A., Ho, D. D., & Stockwell, B. R. (2025). Development of small molecule non-covalent coronavirus 3CL protease inhibitors from DNA-encoded chemical library screening. Nature Communications, 16(1). https://doi.org/10.1038/s41467-024-55421-5
Publication Date
Knaab, T. C., Moritz, A., Pessanha de Carvalho, L., Klein, S., Lungerich, B., Lohse, K., Kruse, L., Mombo-Ngoma, G., Orta, L., Thibaud, J. L., de Villiers, K. A., Fidock, D. A., Burckhardt, B. B., Held, J., Wittlin, S., & Kurz, T. (2024). TKK130 is a 3-Hydroxy-Propanamidine (HPA) with Potent Antimalarial In Vivo Activity and a High Barrier to Resistance. Journal of Medicinal Chemistry. https://doi.org/10.1021/acs.jmedchem.4c01465
Publication Date
Guo, Y., Waltari, E., Lu, H., Sheng, Z., & Wu, X. (2024). Novel rhesus macaque immunoglobulin germline genes identified by three sequencing approaches. Frontiers in Immunology, 15. https://doi.org/10.3389/fimmu.2024.1506348
Publication Date
Cale, E. M., Shen, C.-H., Olia, A. S., Radakovich, N. A., Rawi, R., Yang, Y., Ambrozak, D. R., Bennici, A. K., Chuang, G.-Y., Crooks, E. D., Driscoll, J. I., Lin, B. C., Louder, M. K., Madden, P. J., Messina, M. A., Osawa, K., Stewart-Jones, G. B. E., Verardi, R., Vrakas, Z., … Gorman, J. (2024). A multidonor class of highly glycan-dependent HIV-1 gp120-gp41 interface-targeting broadly neutralizing antibodies. Cell Reports, 43(12), 115010. https://doi.org/10.1016/j.celrep.2024.115010
Publication Date
Martinez-Vega, R., Ishengoma, D. S., Gosling, R., Rosenthal, P. J., Dondorp, A., Barnes, K. I., Nsanzabana, C., Djimde, A. A., Ochola-Oyier, L. I., Tibenderana, J., Chimumbwa, J., Golassa, L., Kapologwe, N. A., Mbacham, W. F., Kamya, M. R., Fidock, D. A., Komatsu, R., von Seidlein, L., & Dhorda, M. (2025). Regional action needed to halt antimalarial drug resistance in Africa. The Lancet, 405(10472), 7–10. https://doi.org/10.1016/s0140-6736(24)02706-5
Publication Date
Li, M., Hunt, B., Balani, B., Ogedegbe, C., Gordon, P., Hayden, J., Glick, N., Chang, A., Wang, S., Caponi, M., Yarber‐Cambron, L., Bhat, S., Ward, T., & Suryadevara, M. (2024). A US‐Based Multi‐Site Pilot to Screen Hepatitis B Surface Antigen‐Positive Patients for Hepatitis D. Journal of Viral Hepatitis, 32(1). Portico. https://doi.org/10.1111/jvh.14043
Publication Date
Edupuganti, S., Hurt, C. B., Stephenson, K. E., Huang, Y., Paez, C. A., Yu, C., Yen, C., Hanscom, B., He, Z., Miner, M. D., Gamble, T., Heptinstall, J., Seaton, K. E., Domin, E., Lin, B. C., McKee, K., Doria-Rose, N., Regenold, S., Spiegel, H., … Afemata, S. (2024). Safety, tolerability, pharmacokinetics, and neutralisation activities of the anti-HIV-1 monoclonal antibody PGT121.414.LS administered alone and in combination with VRC07-523LS in adults without HIV in the USA (HVTN 136/HPTN 092): a first-in-human, open-label, randomised controlled phase 1 trial. The Lancet HIV. https://doi.org/10.1016/s2352-3018(24)00247-9
Publication Date
Hagenah, L. M., Yeo, T., Schindler, K. A., Jeon, J. H., Bloxham, T. S., Small-Saunders, J. L., Mok, S., & Fidock, D. A. (2024). Plasmodium falciparum African PfCRT Mutant Isoforms Conducive to Piperaquine Resistance Are Infrequent and Impart a Major Fitness Cost. The Journal of Infectious Diseases. https://doi.org/10.1093/infdis/jiae617
Publication Date