Department of Biostatistics

Displaying 1 - 50 of 1320CSV

An Inter-Residency Robotic Surgery Simulation Tournament Using a Novel Gamified Dry Lab Curriculum for Urology Trainees

Moran, G. W., Lee, J. A., Margolin, E. J., Schwartz, B., Gorroochurn, P., Badalato, G. M., & Anderson, C. B. (2025). An Inter-Residency Robotic Surgery Simulation Tournament Using a Novel Gamified Dry Lab Curriculum for Urology Trainees. Urology. https://doi.org/10.1016/j.urology.2025.08.047
Authors:
George W Moran
Justin A Lee
Ezra J Margolin
Benjamin Schwartz
Prakash Gorroochurn
Gina M Badalato
Christopher B Anderson
Affiliated Authors:
George W Moran
Justin A Lee
Ezra J Margolin
Benjamin Schwartz
Prakash Gorroochurn
Gina M Badalato
Christopher B Anderson
Columbia Affiliation:
Publication Type:
Article
Unique ID:
10.1016/j.urology.2025.08.047
PMID:
40885494
DOI:
10.1016/j.urology.2025.08.047
Journal:
Urology
Publication Date:
Data Source:
PubMed
Source Link:
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A Simple Data-Driven Dietary Pattern Associated with Lower Risk for Adverse Pregnancy Outcomes

Batuure, A., Austin, G. I., Grobman, W. A., Lindsay, K. L., Haas, D. M., Parry, S., Saade, G. R., Simhan, H. N., Silver, R. M., Reddy, U. M., Kav, A. B., Wang, S., Bello, N. A., & Korem, T. (2025). A Simple Data-Driven Dietary Pattern Associated with Lower Risk for Adverse Pregnancy Outcomes. American Journal of Obstetrics & Gynecology MFM, 101773. https://doi.org/10.1016/j.ajogmf.2025.101773
Authors:
Andrew Batuure
George I Austin
William A Grobman
Karen L Lindsay
David M Haas
Samuel Parry
George R Saade
Hyagriv N Simhan
Robert M Silver
Uma M Reddy
Aya Brown Kav
Shuang Wang
Natalie A Bello
Tal Korem
Affiliated Authors:
Andrew Batuure
George I Austin
Uma M Reddy
Aya Brown Kav
Shuang Wang
Tal Korem
Columbia Affiliation:
Author Keywords:
adverse pregnancy outcomes
diet
dietary index
periconceptional diet
preeclampsia
preterm birth
Publication Type:
Article
Unique ID:
10.1016/j.ajogmf.2025.101773
PMID:
40882841
DOI:
10.1016/j.ajogmf.2025.101773
Journal:
American Journal of Obstetrics and Gynecology: Maternal-Fetal Medicine
Publication Date:
Data Source:
PubMed
Source Link:
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Cerebrospinal fluid microbiome revisited: no evidence of resident bacteria in archived samples

Ward, A., Park, H., Cheng, B., Seeram, D., Thakur, K. T., Uhlemann, A.-C., Noble, J. M., & Papapanou, P. N. (2025). Cerebrospinal fluid microbiome revisited: no evidence of resident bacteria in archived samples. Microbiology Spectrum. https://doi.org/10.1128/spectrum.01308-25
Authors:
Angela Ward
Heekuk Park
Bin Cheng
Dwayne Seeram
Kiran T. Thakur
Anne-Catrin Uhlemann
James M. Noble
Panos N. Papapanou
Affiliated Authors:
Angela Ward
Heekuk Park
Bin Cheng
Dwayne Seeram
Kiran T. Thakur
Anne-Catrin Uhlemann
James M. Noble
Panos N. Papapanou
Columbia Affiliation:
Subjects:
Diversity and Function of Gut Microbiome (OpenAlex Topic)
Blood-Brain Barrier and Neurovascular Interactions (OpenAlex Topic)
Diagnosis, Treatment, and Epidemiology of Nontuberculous Mycobacterial Diseases (OpenAlex Topic)
Publication Type:
Article
Unique ID:
10.1128/spectrum.01308-25
DOI:
10.1128/spectrum.01308-25
Journal:
Microbiology Spectrum
Publication Date:
Data Source:
OpenAlex
Source Link:
View OpenAlex Record

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Incidence of histologic chorioamnionitis following fetal surgery and its association with maternal and neonatal outcomes

Wu, Y. S., Cain-Trivette, C. J., Schmoke, N., Nemeh, C., Snow, M., Fan, W., Debelenko, L., Breslin, N., Miller, R. S., Simpson, L., & Duron, V. (2025). Incidence of histologic chorioamnionitis following fetal surgery and its association with maternal and neonatal outcomes. The Journal of Maternal-Fetal & Neonatal Medicine, 38(1). https://doi.org/10.1080/14767058.2025.2547082
Authors:
Yeu Sanz Wu
Caitlin J Cain-Trivette
Nicholas Schmoke
Christopher Nemeh
Miriam Snow
Weijia Fan
Larisa Debelenko
Noelle Breslin
Russell Scott Miller
Lynn Simpson
Vincent Duron
Affiliated Authors:
Yeu Sanz Wu
Caitlin J Cain-Trivette
Nicholas Schmoke
Christopher Nemeh
Miriam Snow
Weijia Fan
Larisa Debelenko
Noelle Breslin
Russell Scott Miller
Lynn Simpson
Vincent Duron
Columbia Affiliation:
Subjects:
Chorioamnionitis (MeSH)
Meningomyelocele (MeSH)
Fetoscopy (MeSH)
Postoperative Complications (MeSH)
Author Keywords:
fetal therapy
fetoscopic surgery
histologic chorioamnionitis
myelomeningocele repair
placental pathology
Publication Type:
Article
Unique ID:
10.1080/14767058.2025.2547082
PMID:
40858384
DOI:
10.1080/14767058.2025.2547082
Journal:
Journal of Maternal-Fetal and Neonatal Medicine
Publication Date:
Data Source:
PubMed
Source Link:
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The SOX4-Semaphorin3C axis promotes Esophageal Adenocarcinoma progression

Fnu, T., Shi, P., Zhang, W., Fang, Y., Mitani, Y., Zhang, Y., Gabre, J., Ei-Rifai, W., Zaika, A., Chen, Q., Zhu, J., Wang, T. C., Jiang, M., & Que, J. (2025). The SOX4-Semaphorin3C axis promotes esophageal adenocarcinoma progression. Cancer Letters, 633, 218005. https://doi.org/10.1016/j.canlet.2025.218005
Authors:
Tala Fnu
Peiguo Shi
Wanwei Zhang
Yinshan Fang
Yosuke Mitani
Yong Zhang
Joel Gabre
Wael Ei-Rifai
Alexandar Zaika
Qixuan Chen
Jian Zhu
Timothy C Wang
Ming Jiang
Jianwen Que
Affiliated Authors:
Tala Fnu
Peiguo Shi
Wanwei Zhang
Yinshan Fang
Yosuke Mitani
Joel Gabre
Qixuan Chen
Timothy C Wang
Jianwen Que
Columbia Affiliation:
Publication Type:
Article
Unique ID:
10.1016/j.canlet.2025.218005
PMID:
40876500
DOI:
10.1016/j.canlet.2025.218005
Journal:
Cancer Letters
Publication Date:
Data Source:
PubMed
Source Link:
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Young infants with bronchiolitis at low risk of respiratory deterioration in an urban, academic emergency department: prospective cohort study protocol

McLaren, S. H., Camargo, C. A., Florin, T. A., Leu, C.-S., Mejias, A., Han, J., Megjhani, M., Isler, J. R., Sahni, R., Alalqum, T., Green, D. A., Fenster, D., Morel, M. V., Pakholok, T., Lorenzo, V., Park, S., & Dayan, P. S. (2025). Young infants with bronchiolitis at low risk of respiratory deterioration in an urban, academic emergency department: prospective cohort study protocol. BMJ Open, 15(8), e101880. https://doi.org/10.1136/bmjopen-2025-101880
Authors:
Son H McLaren
Carlos A Camargo
Todd A Florin
Cheng-Shiun Leu
Asuncion Mejias
Jiying Han
Murad Megjhani
Joseph R Isler
Rakesh Sahni
Tammam Alalqum
Daniel A Green
Daniel Fenster
Marlin V Morel
Tania Pakholok
Vanessa Lorenzo
Soojin Park
Peter S Dayan
Affiliated Authors:
Son H McLaren
Cheng-Shiun Leu
Jiying Han
Murad Megjhani
Joseph R Isler
Rakesh Sahni
Tammam Alalqum
Daniel A Green
Daniel Fenster
Marlin V Morel
Tania Pakholok
Vanessa Lorenzo
Soojin Park
Peter S Dayan
Columbia Affiliation:
Subjects:
Epidemiology and Pathogenesis of Respiratory Viral Infections (OpenAlex Topic)
Mechanical Ventilation in Respiratory Failure and ARDS (OpenAlex Topic)
Management and Epidemiology of Pneumonia (OpenAlex Topic)
Emergency Service, Hospital (MeSH)
Bronchiolitis (MeSH)
Author Keywords:
paediatrics
paediatric a&e and ambulatory care
paediatric infectious disease & immunisation
Publication Type:
Article
Unique ID:
10.1136/bmjopen-2025-101880
PMID:
40858371
DOI:
10.1136/bmjopen-2025-101880
Journal:
BMJ Open
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View OpenAlex Record

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Multi-population Genome-Wide Association Study Identifies Multiple Novel Loci Associated with Asymptomatic Intracranial Large Artery Stenosis

Liu, M., Khasiyev, F., Spagnolo-Allende, A., Sanchez, D. L., Andrews, H., Yang, Q., Beiser, A. S., Qiao, Y., Romero, J. R., Rundek, T., Brickman, A. M., Manly, J. J., Elkind, M. S., Seshadri, S., Chen, C. L.-H., Del Brutto, O. H., Hilal, S., Wasserman, B. A., Tosto, G., … Gutierrez, J. (2025). Multi-population Genome-Wide Association Study Identifies Multiple Novel Loci Associated with Asymptomatic Intracranial Large Artery Stenosis. International Journal of Stroke. https://doi.org/10.1177/17474930251374471
Authors:
Minghua Liu
Farid Khasiyev
Antonio Spagnolo-Allende
Danurys L Sanchez
Howard Andrews
Qiong Yang
Alexa S Beiser
Ye Qiao
Jose Rafael Romero
Tatjana Rundek
Adam M Brickman
Jennifer J Manly
Mitchell Sv Elkind
Sudha Seshadri
Christopher Li-Hsian Chen
Oscar H Del Brutto
Saima Hilal
Bruce A Wasserman
Giuseppe Tosto
Myriam Fornage
Jose Gutierrez
Affiliated Authors:
Minghua Liu
Antonio Spagnolo-Allende
Danurys L Sanchez
Howard Andrews
Adam M Brickman
Jennifer J Manly
Mitchell Sv Elkind
Giuseppe Tosto
Jose Gutierrez
Columbia Affiliation:
Author Keywords:
asymptomatic intracranial large artery stenosis
atherosclerosis
epidemiology
genome-wide association study
risk factors
stroke
Publication Type:
Article
Unique ID:
10.1177/17474930251374471
PMID:
40851121
DOI:
10.1177/17474930251374471
Journal:
International Journal of Stroke
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

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Serum IgA isotypes are associated with percent emphysema, wall thickness and lung function decline

Pottinger, T., Liu, Z., Liu, L., Buschur, K. L., Curtis, J. L., Manichaikul, A., Rich, S. S., Ortega, V. E., Bleecker, E. R., Meyers, D. A., Hoffman, E. A., Smith, B., Novak, J., Kiryluk, K., & Barr, R. G. (2025). Serum IgA isotypes are associated with percent emphysema, wall thickness and lung function decline. Thorax, thorax-2025-222990. https://doi.org/10.1136/thorax-2025-222990
Authors:
Tess Pottinger
Zhonghua Liu
Lili Liu
Kristina L Buschur
Jeffrey L Curtis
Ani Manichaikul
Stephen S Rich
Victor E Ortega
Eugene R Bleecker
Deborah A Meyers
Eric A Hoffman
Benjamin Smith
Jan Novak
Krzysztof Kiryluk
R Graham Barr
Affiliated Authors:
Tess Pottinger
Zhonghua Liu
Lili Liu
Kristina L Buschur
Benjamin Smith
Krzysztof Kiryluk
R Graham Barr
Columbia Affiliation:
Author Keywords:
emphysema
forced expiratory volume
imaging/ct mri etc
Publication Type:
Article
Unique ID:
10.1136/thorax-2025-222990
PMID:
40846486
DOI:
10.1136/thorax-2025-222990
Journal:
Thorax
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

The impact of eligibility criteria on KRASG12C inhibitor trials in patients with NSCLC

Wooster, M., May, M., Agrawal, P., Lee, J., May, B., Ma, X., Bogdan, S., Shu, C. A., Henick, B. S., Saqi, A., Mansukhani, M., Riely, G., Hershman, D. L., Garcia, C., Arbour, K. C., & Herzberg, B. O. (2025). The impact of eligibility criteria on KRASG12C inhibitor trials in patients with NSCLC. JNCI: Journal of the National Cancer Institute. https://doi.org/10.1093/jnci/djaf236
Authors:
Margaux Wooster
Michael May
Prashasti Agrawal
Jonathan Lee
Benjamin May
Xin Ma
Stephanie Bogdan
Catherine A Shu
Brian S Henick
Anjali Saqi
Mahesh Mansukhani
Gregory Riely
Dawn L Hershman
Christine Garcia
Kathryn C Arbour
Benjamin O Herzberg
Affiliated Authors:
Margaux Wooster
Michael May
Benjamin May
Xin Ma
Catherine A Shu
Brian S Henick
Anjali Saqi
Mahesh Mansukhani
Dawn L Hershman
Benjamin O Herzberg
Columbia Affiliation:
Subjects:
Molecular Characterization of Colorectal Cancer (OpenAlex Topic)
Management and Diagnosis of Thyroid Cancer (OpenAlex Topic)
Epidemiology of Multiple Primary Cancers (OpenAlex Topic)
Author Keywords:
lung cancer
clinical trials
eligibility
Publication Type:
Article
Unique ID:
10.1093/jnci/djaf236
PMID:
40845174
DOI:
10.1093/jnci/djaf236
Journal:
Journal of the National Cancer Institute
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View OpenAlex Record

Record Created:

Increased reflux secondary bile acids are associated with changes to the microbiome and transcriptome in Barrett's esophagus

Tanes, C., Li, Y., Falk, G. W., Ginsberg, G. G., Wang, K. K., Iyer, P. G., Lightdale, C. J., Del Portillo, A., Lagana, S. M., Wang, T. C., Rustgi, A. K., Quante, M., Jin, Z., Wu, G. D., Friedman, E. S., Bittinger, K., Li, H., & Abrams, J. A. (2025). Increased reflux secondary bile acids are associated with changes to the microbiome and transcriptome in Barrett’s esophagus. Gut Microbes, 17(1). https://doi.org/10.1080/19490976.2025.2545420
Authors:
Ceylan Tanes
Yun Li
Gary W Falk
Gregory G Ginsberg
Kenneth K Wang
Prasad G Iyer
Charles J Lightdale
Armando Del Portillo
Stephen M Lagana
Timothy C Wang
Anil K Rustgi
Michael Quante
Zhezhen Jin
Gary D Wu
Elliot S Friedman
Kyle Bittinger
Hongzhe Li
Julian A Abrams
Affiliated Authors:
Charles J Lightdale
Armando Del Portillo
Stephen M Lagana
Timothy C Wang
Anil K Rustgi
Zhezhen Jin
Julian A Abrams
Columbia Affiliation:
Subjects:
Preoperative Chemoradiotherapy for Esophageal Cancer (OpenAlex Topic)
Diagnosis and Management of Gastroesophageal Reflux Disease (OpenAlex Topic)
Esophageal Intervention Techniques (OpenAlex Topic)
Barrett Esophagus (MeSH)
Bile Acids and Salts (MeSH)
Transcriptome (MeSH)
Bacteria (MeSH)
Gastrointestinal Microbiome (MeSH)
Gastroesophageal Reflux (MeSH)
Author Keywords:
barrett’s esophagus
bile acids
esophageal adenocarcinoma
microbiome
Publication Type:
Article
Unique ID:
10.1080/19490976.2025.2545420
PMID:
40844321
DOI:
10.1080/19490976.2025.2545420
Journal:
Gut Microbes
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View OpenAlex Record

Record Created:

Financial models used to embed registered nurses in primary health care settings in the United States: A scoping review

Norful, A. A., Muir, K. J., Cramer, E., Jung, H. J., & Nikpour, J. (2025). Financial models used to embed registered nurses in primary health care settings in the United States: A scoping review. Nursing Outlook, 73(5), 102533. https://doi.org/10.1016/j.outlook.2025.102533
Authors:
Allison A Norful
K Jane Muir
Emily Cramer
Hyun Jin Jung
Jacqueline Nikpour
Affiliated Authors:
Allison A Norful
Hyun Jin Jung
Columbia Affiliation:
Author Keywords:
registered nurse,primary health care,cost,care delivery
Publication Type:
Article
Unique ID:
10.1016/j.outlook.2025.102533
PMID:
40829367
DOI:
10.1016/j.outlook.2025.102533
Journal:
Nursing Outlook
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Impact of a Thinner Snare Wire With Optimal Electrosurgical Unit Settings on the Risk of Delayed Bleeding After Endoscopic Papillectomy: A Propensity Score-Matched Analysis (With Video)

Yamamoto, K., Itoi, T., Tsuchiya, T., Joyama, Y., Tanaka, R., Tonozuka, R., Mukai, S., Nagai, K., Matsunami, Y., Kojima, H., Minami, H., Hirakawa, N., Shionoya, K., & Sofuni, A. (2025). Impact of a Thinner Snare Wire With Optimal Electrosurgical Unit Settings on the Risk of Delayed Bleeding After Endoscopic Papillectomy: A Propensity Score‐Matched Analysis (With Video). Digestive Endoscopy. Portico. https://doi.org/10.1111/den.70008
Authors:
Kenjiro Yamamoto
Takao Itoi
Takayoshi Tsuchiya
Yuki Joyama
Reina Tanaka
Ryosuke Tonozuka
Shuntaro Mukai
Kazumasa Nagai
Yukitoshi Matsunami
Hiroyuki Kojima
Hirohito Minami
Noriyuki Hirakawa
Kento Shionoya
Atsushi Sofuni
Affiliated Authors:
Yuki Joyama
Columbia Affiliation:
Publication Type:
Article
Unique ID:
10.1111/den.70008
PMID:
40829656
DOI:
10.1111/den.70008
Journal:
Digestive Endoscopy
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Association between hyperglycemia and the development of chemotherapy induced peripheral neuropathy among patients with breast cancer in the control trial

Klahr, M. P., Faheem, K., Raghunathan, R. R., Wooster, M., Hershman, D. L., & Accordino, M. K. (2025). Association between hyperglycemia and the development of chemotherapy induced peripheral neuropathy among patients with breast cancer in the control trial. Breast Cancer Research, 27(1). https://doi.org/10.1186/s13058-025-01984-0
Authors:
Miriam Pearl Klahr
Khadija Faheem
Rohit R Raghunathan
Margaux Wooster
Dawn L Hershman
Melissa K Accordino
Affiliated Authors:
Miriam Pearl Klahr
Khadija Faheem
Rohit R Raghunathan
Margaux Wooster
Dawn L Hershman
Melissa K Accordino
Columbia Affiliation:
Subjects:
Chemotherapy-Induced Peripheral Neuropathy in Cancer Treatment (OpenAlex Topic)
Neuroblastoma Research and Treatment (OpenAlex Topic)
Metabolic Reprogramming in Cancer Biology (OpenAlex Topic)
Author Keywords:
breast cancer
chemotherapy induced peripheral neuropathy (cipn)
hyperglycemia
Publication Type:
Article
Unique ID:
10.1186/s13058-025-01984-0
PMID:
40826476
DOI:
10.1186/s13058-025-01984-0
Journal:
Breast Cancer Research
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View Web of Science Record
View OpenAlex Record

Record Created:

Development and administration of the flexible adapted cognitive test battery for schizophrenia (FACTS)

Cai, B., Stone, W. S., Ouyang, X., Deng, F., Chen, H., Qian, M., Grivel, M. M., Keshavan, M. S., Susser, E. S., Yang, L. H., & Phillips, M. R. (2025). Development and administration of the flexible adapted cognitive test battery for schizophrenia (FACTS). Schizophrenia Research: Cognition, 42, 100377. https://doi.org/10.1016/j.scog.2025.100377
Authors:
Bing Cai
Xinyi Ouyang
Fei Deng
Hanhui Chen
Michael R. Phillips
William S. Stone
Matcheri S. Keshavan
Min Qian
Margaux M. Grivel
Lawrence H. Yang
Ezra S. Susser
Affiliated Authors:
Michael R. Phillips
Min Qian
Ezra S. Susser
Columbia Affiliation:
Author Keywords:
facts , cognitive assessment
schizophrenia
undereducated , older participants
psychometric characteristics
Publication Type:
Article
Unique ID:
10.1016/j.scog.2025.100377
DOI:
10.1016/j.scog.2025.100377
Journal:
Schizophrenia Research: Cognition
Publication Date:
Data Source:
Web of Science
Source Link:
View Web of Science Record

Record Created:

Examining associations of temporal changes in maternal emotions and their biomarkers with the development of maternal-fetal bonding across pregnancy

Takács, L., Zhang, Z., Lee, S., Putnam, S. P., Kaňková, Š., Ullmann, J., Hill, M., Velíková, M., Garthus-Niegel, S., & Monk, C. (2025). Examining associations of temporal changes in maternal emotions and their biomarkers with the development of maternal-fetal bonding across pregnancy. Midwifery, 149, 104551. https://doi.org/10.1016/j.midw.2025.104551
Authors:
Lea Takács
Zhijun Zhang
Seonjoo Lee
Samuel P Putnam
Šárka Kaňková
Jana Ullmann
Martin Hill
Marta Velíková
Susan Garthus-Niegel
Catherine Monk
Affiliated Authors:
Zhijun Zhang
Seonjoo Lee
Catherine Monk
Columbia Affiliation:
Author Keywords:
allopregnanolone
anxiety
cortisol
depression
maternal-fetal bonding
pregnancy
stress
Publication Type:
Article
Unique ID:
10.1016/j.midw.2025.104551
PMID:
40818365
DOI:
10.1016/j.midw.2025.104551
Journal:
Midwifery
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Gestational phthalate levels and biomarkers of aging in infants and children from New York City

Bloomquist, T. R., Gaylord, A., Cowell, W., Perera, F., Guo, J., Wang, S., Factor-Litvak, P., Baccarelli, A. A., Herbstman, J. B., & Kupsco, A. (2025). Gestational phthalate levels and biomarkers of aging in infants and children from New York City. Environmental Research, 285, 122583. https://doi.org/10.1016/j.envres.2025.122583
Authors:
Tessa R Bloomquist
Abigail Gaylord
Whitney Cowell
Frederica Perera
Jia Guo
Shuang Wang
Pam Factor-Litvak
Andrea A Baccarelli
Julie B Herbstman
Allison Kupsco
Affiliated Authors:
Tessa R Bloomquist
Abigail Gaylord
Frederica Perera
Jia Guo
Shuang Wang
Pam Factor-Litvak
Julie B Herbstman
Allison Kupsco
Columbia Affiliation:
Publication Type:
Article
Unique ID:
10.1016/j.envres.2025.122583
PMID:
40812703
DOI:
10.1016/j.envres.2025.122583
Journal:
Environmental Research
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View Web of Science Record

Record Created:

PET imaging of the serotonin 1A receptor in major depressive disorder: Hierarchical multivariate analysis of [ 11 C]WAY100635 overcomes outcome measure discrepancies

Matheson, G. J., Zanderigo, F., Miller, J. M., Bartlett, E. A., Mann, J. J., & Ogden, R. T. (2024). PET imaging of the serotonin 1A receptor in major depressive disorder: Hierarchical multivariate analysis of [11C]WAY100635 overcomes outcome measure discrepancies. Imaging Neuroscience, 2. https://doi.org/10.1162/imag_a_00328
Authors:
Granville J Matheson
Francesca Zanderigo
Jeffrey M Miller
Elizabeth A Bartlett
J John Mann
R Todd Ogden
Affiliated Authors:
Granville J Matheson
Francesca Zanderigo
Jeffrey M Miller
Elizabeth A Bartlett
J John Mann
R Todd Ogden
Columbia Affiliation:
Author Keywords:
major depressive disorder
pharmacokinetic modelling
positron emission tomography
serotonin 1a receptor
Publication Type:
Article
Unique ID:
10.1162/imag_a_00328
PMID:
40800447
DOI:
10.1162/imag_a_00328
Journal:
Imaging Neuroscience
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Pragmatic, multicentre, factorial, randomised controlled trial of sepsis electronic prompting for timely intervention and care (SEPTIC trial): a protocol

Ranard, B. L., Qian, M., Cummings, M. J., Zhang, D. Y., Lee, S. M., Beitler, J. R., Applebaum, J. R., Schenck, E. J., Mohamed, H., Trepp, R., Hsu, H., Scofi, J., Southern, W. N., Rossetti, S. C., Yip, N. H., Brodie, D., Sharma, M., Fertel, B. S., & Adelman, J. S. (2025). Pragmatic, multicentre, factorial, randomised controlled trial of sepsis electronic prompting for timely intervention and care (SEPTIC trial): a protocol. BMJ Open, 15(8), e088792. https://doi.org/10.1136/bmjopen-2024-088792
Authors:
Benjamin L Ranard
Min Qian
Matthew J Cummings
David Y Zhang
Shing M Lee
Jeremy R Beitler
Jo R Applebaum
Edward J Schenck
Hassan Mohamed
Richard Trepp
Hanson Hsu
Jean Scofi
William N Southern
Sarah C Rossetti
Natalie H Yip
Daniel Brodie
Manish Sharma
Baruch S Fertel
Jason S Adelman
Affiliated Authors:
Benjamin L Ranard
Min Qian
Matthew J Cummings
Shing M Lee
Jo R Applebaum
Edward J Schenck
Hassan Mohamed
Richard Trepp
Hanson Hsu
Jean Scofi
Sarah C Rossetti
Natalie H Yip
Manish Sharma
Baruch S Fertel
Jason S Adelman
Columbia Affiliation:
Subjects:
Sepsis (MeSH)
Electronic Health Records (MeSH)
Author Keywords:
clinical trial
emergency departments
health informatics
intensive & critical care
randomized controlled trial
adult
aged
article
blood culture
breathing rate
controlled study
electronic health record
emergency ward
heart rate
hospital discharge
hospital mortality
human
intensive care unit
leukocyte count
major clinical study
outcome assessment
practice guideline
sepsis
septic shock
systemic inflammatory response syndrome
diagnosis
hospital emergency service
multicenter study (topic)
randomized controlled trial (topic)
therapy
electronic health records
emergency service, hospital
humans
multicenter studies as topic
pragmatic clinical trials as topic
randomized controlled trials as topic
Publication Type:
Article
Unique ID:
10.1136/bmjopen-2024-088792
PMID:
40789731
DOI:
10.1136/bmjopen-2024-088792
Journal:
BMJ Open
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View Web of Science Record
View Scopus Record

Record Created:

Rates of volume reduction after selective arterial embolization for renal angiomyolipoma

Pericas, R., Liou, C., Aberle, D., Gorroochurn, P., & Anderson, C. B. (2025). Rates of volume reduction after selective arterial embolization for renal angiomyolipoma. Urologic Oncology: Seminars and Original Investigations. https://doi.org/10.1016/j.urolonc.2025.06.021
Authors:
Ramon Pericas
Connie Liou
Dwight Aberle
Prakash Gorroochurn
Christopher B Anderson
Affiliated Authors:
Ramon Pericas
Connie Liou
Dwight Aberle
Prakash Gorroochurn
Christopher B Anderson
Columbia Affiliation:
Author Keywords:
angiomyolipoma
interventional radiology
therapeutic embolization
tuberous sclerosis
urologic diseases
urologic oncology
Publication Type:
Article
Unique ID:
10.1016/j.urolonc.2025.06.021
PMID:
40784848
DOI:
10.1016/j.urolonc.2025.06.021
Journal:
Urologic Oncology: Seminars and Original Investigations
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Exome analysis links kidney malformations to developmental disorders and reveals causal genes

Milo Rasouly, H., Krishna Murthy, S. B., Vena, N., Povysil, G., Beenken, A., Verbitsky, M., Shril, S., Lekkerkerker, I., Yang, S., Khan, A., Fasel, D., Wongboonsin, J., Martino, J., Ke, J., Elefant, N., Tomar, N., Harnof, O., Kisselev, S., Bheda, S., … Gharavi, A. G. (2025). Exome analysis links kidney malformations to developmental disorders and reveals causal genes. Nature Communications, 16(1). https://doi.org/10.1038/s41467-025-62319-3
Authors:
Hila Milo Rasouly
Sarath Babu Krishna Murthy
Natalie Vena
Gundula Povysil
Andrew Beenken
Miguel Verbitsky
Shirlee Shril
Iris Lekkerkerker
Sandy Yang
Atlas Khan
David Fasel
Janewit Wongboonsin
Jeremiah Martino
Juntao Ke
Naama Elefant
Nikita Tomar
Ofek Harnof
Sergey Kisselev
Shiraz Bheda
Sivan Reytan-Miron
Tze Y Lim
Anna Jamry-Dziurla
Francesca Lugani
Jun Y Zhang
Maddalena Marasa
Victoria Kolupaeva
Emily E Groopman
Gina Jin
Iman Ghavami
Kelsey O Stevens
Arielle C Coughlin
Byum Hee Kil
Debanjana Chatterjee
Drew Bradbury
Jason Zheng
Karla Mehl
Maria Morban
Rachel Reingold
Stacy Piva
Xueru Mu
Adele Mittrori
Agnieszka Szmigielska
Aleksandra Gliwińska
Andrea Ranghino
Andrew S Bomback
Andrzej Badenski
Anna Latos-Bielenska
Valentina Capone
Anna Materna-Kiryluk
Antonio Amoroso
Claudia Izzi
Claudio La Scola
David Jonathan Cohen
Domenico Santoro
Dorota Drozdz
Enrico Fiaccadori
Fangming Lin
Francesco Scolari
Francesco Tondolo
Gaetano La Manna
Gerald B Appel
Gian Marco Ghiggeri
Gianluigi Zaza
Giovanni Montini
Giuseppe Masnata
Grażyna Krzemien
Isabella Pisani
Jai Radhakrishnan
Katarzyna Zachwieja
Loreto Gesualdo
Luigi Biancone
Davide Meneghesso
Malgorzata Mizerska-Wasiak
Marcin Tkaczyk
Marcin Zaniew
Maria K Borszewska-Kornacka
Maria Szczepanska
Marijan Saraga
Maya K Rao
Monica Bodria
Monika Miklaszewska
Natalie S Uy
Olga Baraldi
Omar Bjanid
Pasquale Esposito
Pasquale Zamboli
Pierluigi Marzuillo
Pietro A Canetta
Przemyslaw Sikora
Rik Westland
Russell J Crew
Shumyle Alam
Stefano Guarino
Susanna Negrisolo
Thomas Hays
Shrikant Mane
Valeria Grandinetti
Velibor Tasic
Vladimir J Lozanovski
Yasar Caliskan
David Goldstein
Richard P Lifton
Iuliana Ionita-Laza
Krzysztof Kiryluk
Albertien M van Eerde
Friedhelm Hildebrandt
Simone Sanna-Cherchi
Ali G Gharavi
Affiliated Authors:
Hila Milo Rasouly
Sarath Babu Krishna Murthy
Natalie Vena
Gundula Povysil
Andrew Beenken
Miguel Verbitsky
Sandy Yang
Atlas Khan
David Fasel
Jeremiah Martino
Juntao Ke
Naama Elefant
Nikita Tomar
Ofek Harnof
Sergey Kisselev
Shiraz Bheda
Sivan Reytan-Miron
Tze Y Lim
Jun Y Zhang
Maddalena Marasa
Victoria Kolupaeva
Emily E Groopman
Gina Jin
Iman Ghavami
Kelsey O Stevens
Arielle C Coughlin
Byum Hee Kil
Debanjana Chatterjee
Drew Bradbury
Jason Zheng
Karla Mehl
Maria Morban
Rachel Reingold
Stacy Piva
Xueru Mu
Adele Mittrori
Andrew S Bomback
David Jonathan Cohen
Fangming Lin
Gerald B Appel
Jai Radhakrishnan
Maya K Rao
Pietro A Canetta
Russell J Crew
Thomas Hays
David Goldstein
Iuliana Ionita-Laza
Krzysztof Kiryluk
Simone Sanna-Cherchi
Ali G Gharavi
Columbia Affiliation:
Subjects:
Molecular Mechanisms of Kidney Development and Disease (OpenAlex Topic)
Renal Cell Carcinoma (OpenAlex Topic)
Epigenetic Modifications and Their Functional Implications (OpenAlex Topic)
Kidney (MeSH)
Developmental Disabilities (MeSH)
Exome (MeSH)
Urogenital Abnormalities (MeSH)
Vesico-Ureteral Reflux (MeSH)
Publication Type:
Article
Unique ID:
10.1038/s41467-025-62319-3
PMID:
40774958
DOI:
10.1038/s41467-025-62319-3
Journal:
Nature Communications
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View OpenAlex Record

Record Created:

A Bayesian Mixture of Exponential Family Factor Models for Uncovering Disease Progression Subtypes

Kang, K., Wang, Q., Xu, Z., & Wang, Y. (2025). A Bayesian Mixture of Exponential Family Factor Models for Uncovering Disease Progression Subtypes. Statistics in Medicine, 44(18–19). Portico. https://doi.org/10.1002/sim.70211
Authors:
Kai Kang
Qinxia Wang
Zhanpeng Xu
Yuanjia Wang
Affiliated Authors:
Qinxia Wang
Yuanjia Wang
Columbia Affiliation:
Subjects:
Disease Progression (MeSH)
Models, Statistical (MeSH)
Author Keywords:
heterogeneity
integrative analysis
mixture model
neurological disorders
nonlinear trajectory
dopamine
biomarkers
biological marker
adult
algorithm
article
bayesian network
central nervous system
cerebrospinal fluid
cognition
cognitive appraisal
cohort analysis
disease exacerbation
exponential family factor model
female
follow up
heredity
human
human experiment
inflammation
learning algorithm
longitudinal study
machine learning
male
mds-unified parkinson disease rating scale
middle aged
nerve cell network
neuroimaging
neurologic disease
normal human
parkinson disease
predictive model
principal component analysis
random forest
sensitivity and specificity
bayes theorem
computer simulation
diagnostic imaging
markov chain
monte carlo method
statistical model
disease progression
humans
markov chains
models, statistical
Publication Type:
Article
Unique ID:
10.1002/sim.70211
PMID:
40772829
DOI:
10.1002/sim.70211
Journal:
Statistics in Medicine
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View Scopus Record

Record Created:

Virus-human chromatin interactions reorganise 3D genome and hijack KDM5B for promoting metastasis in nasopharyngeal carcinoma

Chung, D. L.-S., Hou, Z., Wang, Y., Islam, K. A., Liu, S., Liu, J., Chow, L. K.-Y., Wong, Y. Y.-W., Chak, C. P.-T., Zhang, Y., Gong, L., Qi, Z., Cheng, K.-W., Yu, Z., Feng, P., Huang, Z., Ngan, R. K.-C., Guan, X., Ng, W.-T., … Dai, W. (2025). Virus-human chromatin interactions reorganise 3D genome and hijack KDM5B for promoting metastasis in nasopharyngeal carcinoma. Nature Communications, 16(1). https://doi.org/10.1038/s41467-025-61597-1
Authors:
Dittman Lai-Shun Chung
Zhaozheng Hou
Kazi Anisha Islam
Songran Liu
Larry Ka-Yue Chow
Yuki Yuk-Wun Wong
Cyrus Paak-Ting Chak
Yingpei Zhang
Lanqi Gong
Ziyang Qi
Kiu-Wai Cheng
Zhuoyou Yu
Roger Kai-Cheong Ngan
Xinyuan Guan
Wai-Tong Ng
Dora Lai-Wan Kwong
Anne Wing-Mui Lee
Victor Ho-Fun Lee
Wei Dai
Jiayan Liu
Honglin Chen
Ying Wang
Yunfei Xia
Ping Feng
Zilu Huang
Zhonghua Liu
Anna Chi-Man Tsang
Affiliated Authors:
Zhonghua Liu
Columbia Affiliation:
Publication Type:
Article
Unique ID:
10.1038/s41467-025-61597-1
PMID:
40759888
DOI:
10.1038/s41467-025-61597-1
Journal:
Nature Communications
Publication Date:
Data Source:
Web of Science
Source Link:
View Web of Science Record

Record Created:

Multilevel Regression and Poststratification Using Margins of Poststratifiers: Improving Inference for HIV Health Outcomes During the COVID-19 Pandemic

Pitts, A. J., Yomogida, M., Aidala, A., Gelman, A., & Chen, Q. (2025). Multilevel Regression and Poststratification Using Margins of Poststratifiers: Improving Inference for HIV Health Outcomes During the COVID‐19 Pandemic. Statistics in Medicine, 44(18–19). Portico. https://doi.org/10.1002/sim.70223
Authors:
Amy J. Pitts
Maiko Yomogida
Angela A. Aidala
Andrew E. Gelman
Qixuan Chen
Affiliated Authors:
Qixuan Chen
Columbia Affiliation:
Author Keywords:
bart
bayesian inference
mrp
raking
sampling bias
rstan
rstanarm package in r
adult
article
bayesian network
binomial distribution
coronavirus disease 2019
demographics
female
geographic distribution
health outcome
human
human immunodeficiency virus infection
male
margins of poststratifier
middle aged
monte carlo method
multilevel analysis
new york
pandemic
poisson distribution
poisson regression
population research
population size
prediction
regression analysis
sampling bias
simulation
virus load
virus strain
virus survival
bayes theorem
epidemiology
psychology
statistical model
bayes theorem
covid-19
hiv infections
humans
models, statistical
multilevel analysis
pandemics
regression analysis
Publication Type:
Article
Unique ID:
10.1002/sim.70223
PMID:
40791168
DOI:
10.1002/sim.70223
Journal:
Statistics in Medicine
Publication Date:
Data Source:
Scopus
Source Link:
View Scopus Record

Record Created:

Hyperbaric Oxygen and Sudden Sensorineural Hearing Loss: A Systematic Review and Meta-Analysis

Alter, I. L., Hamiter, M., Han, J., Leu, C., Usseglio, J., & Lalwani, A. K. (2025). Hyperbaric Oxygen and Sudden Sensorineural Hearing Loss: A Systematic Review and Meta‐Analysis. The Laryngoscope. Portico. https://doi.org/10.1002/lary.32472
Authors:
Isaac L Alter
Mickie Hamiter
Jiying Han
Cheng-Shiun Leu
John Usseglio
Anil K Lalwani
Affiliated Authors:
Isaac L Alter
Mickie Hamiter
Jiying Han
Cheng-Shiun Leu
John Usseglio
Anil K Lalwani
Columbia Affiliation:
Author Keywords:
hearing loss
hyperbaric oxygen
sensorineural hearing loss
Publication Type:
Article
Unique ID:
10.1002/lary.32472
PMID:
40747804
DOI:
10.1002/lary.32472
Journal:
Laryngoscope
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Mid‐pregnancy uterine artery Dopplers and child neurodevelopment

McElwee, E. R., Lee, S., Babineau, V., Ferguson, P. L., Hunt, K. J., Grantz, K. L., Grobman, W. A., Wapner, R. J., Skupski, D. W., Sciscione, A., Wing, D. A., Nageotte, M. P., Chien, E. K., Tita, A. T., Takács, L., Monk, C., & Newman, R. B. (2025). Mid‐pregnancy uterine artery Dopplers and child neurodevelopment. Pregnancy, 1(5). Portico. https://doi.org/10.1002/pmf2.70076
Authors:
Eliza R. McElwee
Seonjoo Lee
Vanessa Babineau
Pamela L. Ferguson
Kelly J. Hunt
Katherine L. Grantz
William A. Grobman
Ronald J. Wapner
Daniel Skupski
Anthony Sciscione
Deborah A. Wing
Michael P. Nageotte
Edward K. Chien
Alan Tita
L Takács
Catherine Monk
Roger Newman
Affiliated Authors:
Seonjoo Lee
Vanessa Babineau
Ronald J. Wapner
Daniel Skupski
Catherine Monk
Columbia Affiliation:
Subjects:
Pathophysiology and Management of Preeclampsia (OpenAlex Topic)
Developmental Origins of Adult Health and Disease (OpenAlex Topic)
Management of Cardiovascular Diseases during Pregnancy (OpenAlex Topic)
Publication Type:
Article
Unique ID:
10.1002/pmf2.70076
DOI:
10.1002/pmf2.70076
Publication Date:
Data Source:
OpenAlex
Source Link:
View OpenAlex Record

Record Created:

Pilot feasibility of a financial and health-related social needs navigation intervention (AYA-NAV) for adolescents and young adults with Cancer: Study protocol for a prospective, single-arm study

Khurana, R. K., Valera, K., Raghunathan, R., Gallagher, K. D., Angove, R. SM., Bradshaw, E., Patton, J., Alvarado, S., Crespo, S., Judon, K., DiCola, K., Steinberg, D. M., Wang, S., Hershman, D. L., & Beauchemin, M. P. (2025). Pilot Feasibility of a Financial and Health-related Social Needs Navigation Intervention (AYA-NAV) for Adolescents and Young Adults with Cancer: Study Protocol for a Prospective, Single-arm Study. Contemporary Clinical Trials Communications, 101523. https://doi.org/10.1016/j.conctc.2025.101523
Authors:
Rhea K Khurana
Kathryn Valera
Rohit Raghunathan
Kathleen D Gallagher
Rebekah Sm Angove
Erin Bradshaw
Janet Patton
Sabrina Alvarado
Stephen Crespo
Kimberly Judon
Katie DiCola
Dara M Steinberg
Shikun Wang
Dawn L Hershman
Melissa P Beauchemin
Affiliated Authors:
Rhea K Khurana
Kathryn Valera
Rohit Raghunathan
Sabrina Alvarado
Stephen Crespo
Katie DiCola
Dara M Steinberg
Shikun Wang
Dawn L Hershman
Melissa P Beauchemin
Columbia Affiliation:
Subjects:
Economic Burden of Cancer Treatment (OpenAlex Topic)
Pediatric Cancer and Quality of Life (OpenAlex Topic)
Integration of Palliative Care in End-of-Life (OpenAlex Topic)
Supporting Health Care Transition from Adolescence to Adulthood (OpenAlex Topic)
Author Keywords:
adolescents and young adults (aya)
community-partnered intervention
financial toxicity
health-related social needs
Publication Type:
Article
Unique ID:
10.1016/j.conctc.2025.101523
PMID:
40726516
DOI:
10.1016/j.conctc.2025.101523
Journal:
Contemporary Clinical Trials Communications
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View OpenAlex Record

Record Created:

Identification of transcriptomic sepsis endotypes in sub-Saharan Africa: derivation, validation, and global alignment in two Ugandan cohorts

Cummings, M. J., Lutwama, J. J., Tomoiaga, A. S., Zhao, M., Owor, N., Lu, X., Eliku, P. J., Ross, J. E., Nsereko, C., Nayiga, I., Kyebambe, S., Nsubuga, J. B., Shinyale, J., Asasira, I., Kiyingi, T., Ochar, T., Kiwubeyi, M., Nankwanga, R., Reynolds, S. J., … Bakamutumaho, B. (2025). Identification of transcriptomic sepsis endotypes in sub-Saharan Africa: derivation, validation, and global alignment in two Ugandan cohorts. Intensive Care Medicine. https://doi.org/10.1007/s00134-025-08047-0
Authors:
Matthew J Cummings
Julius J Lutwama
Alin S Tomoiaga
Meng Zhao
Nicholas Owor
Xuan Lu
Peter James Eliku
Jesse E Ross
Christopher Nsereko
Irene Nayiga
Stephen Kyebambe
John Bosco Nsubuga
Joseph Shinyale
Ignatius Asasira
Tonny Kiyingi
Thomas Ochar
Moses Kiwubeyi
Rittah Nankwanga
Steven J Reynolds
Martina Cathy Nakibuuka
John Kayiwa
Mercy Haumba
Joweria Nakaseegu
Xiaoyu Che
Kai Nie
Seunghee Kim-Schulze
Sankar Ghosh
W Ian Lipkin
Max R O'Donnell
Barnabas Bakamutumaho
Affiliated Authors:
Matthew J Cummings
Alin S Tomoiaga
Meng Zhao
Xuan Lu
Jesse E Ross
Xiaoyu Che
Sankar Ghosh
W Ian Lipkin
Max R O'Donnell
Columbia Affiliation:
Author Keywords:
africa
hiv
high-throughput nucleotide sequencing
precision medicine
sepsis
Grants:
D43TW009607 (NIH – Fogarty International Center)
K23AI163364 (NIH – National Institute of Allergy and Infectious Diseases)
R01AI184997 (NIH – National Institute of Allergy and Infectious Diseases)
UL1TR001873 (NIH – National Center for Advancing Translational Sciences)
ZIAAI001040 (NIH – National Institute of Allergy and Infectious Diseases)
Publication Type:
Article
Unique ID:
10.1007/s00134-025-08047-0
PMID:
40728637
DOI:
10.1007/s00134-025-08047-0
Journal:
Intensive Care Medicine
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Periodontitis, type 2 diabetes, and other risk factors for implant failure: A nested case-control study

Sobhani, S., Liu, Z., Hoopes, C. L., Oung, T., Arora, M., Racha, D. S., Yang, T., Kang, P., & Momen‐Heravi, F. (2025). Periodontitis, type 2 diabetes, and other risk factors for implant failure: A nested case‐control study. Journal of Periodontology. Portico. https://doi.org/10.1002/jper.11380
Authors:
Shaghayegh Sobhani
Zheyan Liu
Cher L Hoopes
Tammy Oung
Monicka Arora
Deepthi Sree Racha
Teresa Yang
Philip Kang
Fatemeh Momen-Heravi
Affiliated Authors:
Shaghayegh Sobhani
Zheyan Liu
Cher L Hoopes
Tammy Oung
Monicka Arora
Deepthi Sree Racha
Teresa Yang
Philip Kang
Columbia Affiliation:
Author Keywords:
dental implants
diabetes mellitus type 2
osteoporosis
periodontitis
Publication Type:
Article
Unique ID:
10.1002/jper.11380
PMID:
40729469
DOI:
10.1002/jper.11380
Journal:
Journal of Periodontology
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Optimal Dose of Intranasal Midazolam for Procedural Sedation in Children: A Randomized Clinical Trial

Tsze, D. S., Woodward, H. A., McLaren, S. H., Leu, C.-S. S., Venn, A. M. R., Hu, N. Y., Flores-Sanchez, P. L., Stefan, B. R., Shen, S. T., Ekladios, M. J., Cravero, J. P., & Dayan, P. S. (2025). Optimal Dose of Intranasal Midazolam for Procedural Sedation in Children. JAMA Pediatrics. https://doi.org/10.1001/jamapediatrics.2025.2181
Authors:
Daniel S Tsze
Hilary A Woodward
Son H McLaren
Cheng-Shiun S Leu
April M R Venn
Nina Y Hu
Pamela L Flores-Sanchez
Bianca R Stefan
Sripriya T Shen
Mina J Ekladios
Joseph P Cravero
Peter S Dayan
Affiliated Authors:
Daniel S Tsze
Hilary A Woodward
Son H McLaren
Cheng-Shiun S Leu
April M R Venn
Nina Y Hu
Pamela L Flores-Sanchez
Bianca R Stefan
Sripriya T Shen
Mina J Ekladios
Peter S Dayan
Columbia Affiliation:
Publication Type:
Article
Unique ID:
10.1001/jamapediatrics.2025.2181
PMID:
40720114
DOI:
10.1001/jamapediatrics.2025.2181
Journal:
JAMA Pediatrics
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Oral health and behavioral problems in children living with and without HIV in South Africa

Barrios-Tascon, A., Wang, T., Strehlau, R., Tobin, N. H., Violari, A., Li, F., Patel, F., Liberty, A., Shiau, S., Wadhwa, S., Yin, M. T., Wang, S., Tiemessen, C. T., Aldrovandi, G. M., & Kuhn, L. (2025). Oral health and behavioral problems in children living with and without HIV in South Africa. AIDS Care, 1–13. https://doi.org/10.1080/09540121.2025.2536720
Authors:
Ana Barrios
Tian Wang
Renate Strehlau
Nicole H. Tobin
Avy Violari
Fan Li
Faeezah Patel
Afaaf Liberty
Stephanie Shiau
Sunil Wadhwa
Michael T. Yin
Shuang Wang
Caroline T. Tiemessen
Grace M. Aldrovandi
Louise Kuhn
Affiliated Authors:
Ana Barrios
Tian Wang
Sunil Wadhwa
Michael T. Yin
Shuang Wang
Louise Kuhn
Columbia Affiliation:
Subjects:
Changing Prevalence of HIV-Associated Oral Lesions (OpenAlex Topic)
Prevention and Treatment of HIV/AIDS Infection (OpenAlex Topic)
Epidemiology and Pathogenesis of Pneumocystis Pneumonia (OpenAlex Topic)
Author Keywords:
children with hiv
good health and well being
south africa
behavioral problems
microbiome
oral swab
quality education
Publication Type:
Article
Unique ID:
10.1080/09540121.2025.2536720
DOI:
10.1080/09540121.2025.2536720
Journal:
AIDS Care
Publication Date:
Data Source:
OpenAlex
Source Link:
View OpenAlex Record
View PubMed Record

Record Created:

Variability in trends of opioid-related hospital utilization among U.S. Adults, 2016-2021 check

Chen, L., Chen, Z., Ding, J., Chou, R., Ashton-James, C. E., Shi, B., Mathieson, S., Radojčić, M. R., Anderson, D. B., Zheng, R., Fu, R., Chen, Y., Qi, L., Zhou, H., Feng, S., & Ferreira, M. L. (2025). Variability in trends of opioid-related hospital utilization among U.S. Adults, 2016–2021 check. EClinicalMedicine, 86, 103355. https://doi.org/10.1016/j.eclinm.2025.103355
Authors:
Lingxiao Chen
Zhuo Chen
Jiaming Ding
Roger Chou
Claire E Ashton-James
Baoyi Shi
Stephanie Mathieson
Maja R Radojčić
David B Anderson
Ruiyuan Zheng
Runhan Fu
Yujie Chen
Lei Qi
Hengxing Zhou
Shiqing Feng
Manuela L Ferreira
Affiliated Authors:
Baoyi Shi
Columbia Affiliation:
Author Keywords:
covid-19 pandemic
hospital utilization
opioid
pain
variability
diamorphine
fentanyl
methadone
opiate
joinpoint program version 5.2.0
spss version 27.0
stata version 17.0
adult
aged
article
bacteremia
cellulitis
coronavirus disease 2019
cross-sectional study
detoxification
endocarditis
female
health care cost
hospitalization
human
infectious arthritis
male
middle aged
opioid use disorder
outcome assessment
pandemic
phlebitis
proxy
public health
sepsis
social status
socioeconomics
substance abuse
united states
very elderly
Publication Type:
Article
Unique ID:
10.1016/j.eclinm.2025.103355
PMID:
40697963
DOI:
10.1016/j.eclinm.2025.103355
Journal:
EClinicalMedicine
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View Web of Science Record
View Scopus Record

Record Created:

Enhancing EHR-based pancreatic cancer prediction with LLM-derived embeddings

Park, J., Patterson, J., Acitores Cortina, J. M., Gu, T., Hur, C., & Tatonetti, N. (2025). Enhancing EHR-based pancreatic cancer prediction with LLM-derived embeddings. Npj Digital Medicine, 8(1). https://doi.org/10.1038/s41746-025-01869-8
Authors:
Jiheum Park
Jason Patterson
Jose M Acitores Cortina
Tian Gu
Chin Hur
Nicholas Tatonetti
Affiliated Authors:
Jiheum Park
Jason Patterson
Tian Gu
Chin Hur
Nicholas Tatonetti
Columbia Affiliation:
Subjects:
Deep Learning in Medical Image Analysis (OpenAlex Topic)
Pancreatic Cancer Research and Treatment (OpenAlex Topic)
Radiomics in Medical Imaging Analysis (OpenAlex Topic)
Publication Type:
Article
Unique ID:
10.1038/s41746-025-01869-8
PMID:
40691317
DOI:
10.1038/s41746-025-01869-8
Journal:
npj Digital Medicine
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View Web of Science Record
View OpenAlex Record

Record Created:

Classification of childhood obesity using longitudinal clinical body mass index and its validation

Ebrahim, N., Khadegi, A., Deng, S., Qian, K., Yao, Z., Thaker, S., May, B., Patibandala, N., Lopez-Pintado, S., & Thaker, V. V. (2025). Classification of childhood obesity using longitudinal clinical body mass index and its validation. International journal of obesity (2005), 10.1038/s41366-025-01836-z. Advance online publication. https://doi.org/10.1038/s41366-025-01836-z

Authors:
Nia Ebrahim
Apruva Khadegi
Shuliang Deng
Kun Qian
Zonghui Yao
Shaleen Thaker
Benjamin May
Nandan Patibandala
Sara Lopez-Pintado
Vidhu V Thaker
Affiliated Authors:
Nia Ebrahim
Apruva Khadegi
Kun Qian
Benjamin May
Vidhu V Thaker
Columbia Affiliation:
Publication Type:
Article
Unique ID:
10.1038/s41366-025-01836-z
PMID:
40670646
DOI:
10.1038/s41366-025-01836-z
Journal:
International Journal of Obesity
Publication Date:
Data Source:
PubMed
Source Link:
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Record Created:

Age Differences in Cannabis Consumption Patterns and in Associations Between Delta-9-Tetrahydrocannabinol Intake and Cannabis Use Disorders Among Adults with Daily Use

Livne, O., Borodovsky, J., Budney, A. J., Wisell, C. G., Habib, M. I., Struble, C. A., Chen, L., Liu, J., Wall, M., Aharonovich, E., & Hasin, D. S. (2025). Age Differences in Cannabis Consumption Patterns and in Associations Between Delta-9-Tetrahydrocannabinol Intake and Cannabis Use Disorders Among Adults with Daily Use. Cannabis and cannabinoid research, 10.1177/25785125251360976. Advance online publication. https://doi.org/10.1177/25785125251360976

Authors:
Ofir Livne
Jacob Borodovsky
Alan J Budney
Caroline G Wisell
Mohammad I Habib
Cara A Struble
Lynn Chen
Jun Liu
Melanie Wall
Efrat Aharonovich
Deborah S Hasin
Affiliated Authors:
Ofir Livne
Caroline G Wisell
Melanie Wall
Efrat Aharonovich
Deborah S Hasin
Columbia Affiliation:
Author Keywords:
cannabis use disorder
elderly
epidemiology
middle age
older adults
tetrahydrocannabinol
Publication Type:
Article
Unique ID:
10.1177/25785125251360976
PMID:
40667820
DOI:
10.1177/25785125251360976
Journal:
Cannabis and Cannabinoid Research
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Metabolic Signature of Arsenic Exposure and Metabolism: The Folic Acid and Creatine Trial

Li, W., Wu, H., Goldsmith, J., Glabonjat, R. A., Ilievski, V., Balac, O., Slavkovich, V., Pinto-Pacheco, B., Lin, X., Parvez, F., Jackson, G. L., Siddique, A. B., Uddin, M. N., Islam, T., Martinez-Morata, I., Navas-Acien, A., Niedzwiecki, M. M., Kioumourtzoglou, M.-A., Pierce, B. L., … Gamble, M. V. (2025). Metabolic Signature of Arsenic Exposure and Metabolism: The Folic Acid and Creatine Trial. Environmental Science & Technology, 59(29), 14905–14916. https://doi.org/10.1021/acs.est.5c01597
Authors:
Wending Li
Haotian Wu
Jeff Goldsmith
Ronald A Glabonjat
Vesna Ilievski
Olgica Balac
Vesna Slavkovich
Brismar Pinto-Pacheco
Xiangping Lin
Faruque Parvez
Gabriela L Jackson
Abu B Siddique
Mohammad Nasir Uddin
Tariqul Islam
Irene Martinez-Morata
Ana Navas-Acien
Megan M Niedzwiecki
Marianthi-Anna Kioumourtzoglou
Brandon L Pierce
Joseph H Graziano
Teodoro Bottiglieri
Douglas I Walker
Mary V Gamble
Affiliated Authors:
Wending Li
Haotian Wu
Jeff Goldsmith
Ronald A Glabonjat
Vesna Ilievski
Olgica Balac
Vesna Slavkovich
Faruque Parvez
Gabriela L Jackson
Irene Martinez-Morata
Ana Navas-Acien
Marianthi-Anna Kioumourtzoglou
Joseph H Graziano
Mary V Gamble
Columbia Affiliation:
Subjects:
Arsenic (MeSH)
Creatine (MeSH)
Folic Acid (MeSH)
Author Keywords:
arsenic
folic acid
metabolomics
one-carbon metabolism
randomized controlled trial
acetyl coenzyme a
ademetionine
arsenic acid
arsenic trioxide
betaine
chlordiazepoxide
choline
creatine
cystathionine
cysteine
dimethylglycine
methionine
phenylalanine
s adenosylhomocysteine
tryptophan
tyrosine
alkylation
biochemistry
biomolecules
body fluids
carbon
information dissemination
metabolism
metabolites
methylation
physiology
american chemical society
arsenic exposure
arsenic species
carbon metabolism
folic acids
inas
metabolomic profiling
organoarsenic derivative
metabolite
public health
urine
adult
article
biosynthesis
controlled study
exposure
female
human
liquid chromatography-mass spectrometry
male
metabolic fingerprinting
metabolome
humans
Publication Type:
Article
Unique ID:
10.1021/acs.est.5c01597
PMID:
40668877
DOI:
10.1021/acs.est.5c01597
Journal:
Environmental Science and Technology
Publication Date:
Data Source:
PubMed
Source Link:
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Record Created:

The Longitudinal Association of Physical Function and Frailty on Driving Strategic Self-Regulation Among Older Adults

Mielenz, T. J., Svancara, A., Jia, H., Arnold, L. S., Wheeler, K., DiGuiseppi, C., Eby, D. W., Molnar, L. J., Hill, L. L., Strogatz, D. S., Andrews, H. F., Li, G., & Yang, C. Y. D. (2025). The Longitudinal Association of Physical Function and Frailty on Driving Strategic Self-Regulation Among Older Adults. Journal of Applied Gerontology. https://doi.org/10.1177/07334648251359020
Authors:
Thelma J Mielenz
Austin Svancara
Haomiao Jia
Lindsay S Arnold
Katie Wheeler
Carolyn DiGuiseppi
David W Eby
Lisa J Molnar
Linda L Hill
David S Strogatz
Howard F Andrews
Guohua Li
C Y David Yang
Affiliated Authors:
Thelma J Mielenz
Haomiao Jia
Howard F Andrews
Guohua Li
Columbia Affiliation:
Author Keywords:
driving
frailty
older adults
physical function
strategic self-regulation
Publication Type:
Article
Unique ID:
10.1177/07334648251359020
PMID:
40661035
DOI:
10.1177/07334648251359020
Journal:
Journal of Applied Gerontology
Publication Date:
Data Source:
PubMed
Source Link:
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Record Created:

Robust angle-based transfer learning in high dimensions

Gu, T., Han, Y., & Duan, R. (2024). Robust angle-based transfer learning in high dimensions. Journal of the Royal Statistical Society Series B: Statistical Methodology, 87(3), 723–745. https://doi.org/10.1093/jrsssb/qkae111
Authors:
Tian Gu
Yi Han
Rui Duan
Affiliated Authors:
Tian Gu
Yi Han
Columbia Affiliation:
Author Keywords:
high-dimensional asymptotics
model aggregation
risk prediction
transfer learning
Publication Type:
Article
Unique ID:
10.1093/jrsssb/qkae111
PMID:
40661839
DOI:
10.1093/jrsssb/qkae111
Journal:
Journal of the Royal Statistical Society, Series B: Statistical Methodology
Publication Date:
Data Source:
PubMed
Source Link:
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Record Created:

A Longitudinal Observational Study of a Powder-Based Supplement for a Future Synbiotic Trial in Breastfed Children From South Africa

Shivakoti, R., Laughton, B., Shafiq, M., Schoeman, E., Glashoff, R. H., Barnabas, S., Fry, S., Leu, C.-S., Wang, S., Bode, L., Aldrovandi, G., Kuhn, L., & Slogrove, A. L. (2025). A Longitudinal Observational Study of a Powder-Based Supplement for a Future Synbiotic Trial in Breastfed Children From South Africa. Sage Open Pediatrics, 12. https://doi.org/10.1177/2333794x241309003
Authors:
Rupak Shivakoti
Barbara Laughton
Mehr Shafiq
Elisma Schoeman
Richard H Glashoff
Shaun Barnabas
Samantha Fry
Cheng-Shiun Leu
Shuang Wang
Lars Bode
Grace Aldrovandi
Louise Kuhn
Amy L Slogrove
Affiliated Authors:
Rupak Shivakoti
Mehr Shafiq
Cheng-Shiun Leu
Shuang Wang
Louise Kuhn
Columbia Affiliation:
Author Keywords:
feasibility
synbiotic
child morbidity
breastmilk
hmo
Publication Type:
Duplicate Publication
Unique ID:
10.1177/2333794x241309003
PMID:
40655430
DOI:
10.1177/2333794x241309003
Journal:
Sage Open Pediatrics
Publication Date:
Data Source:
PubMed
Source Link:
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Record Created:

Isotopic Fractionation of Natural Uranium in Mice as a Potential Biomarker of Renal Accumulation

Lucey, C. M., Pearson, B. L., DeSantis, K., Goldsmith, J., Halliday, A. N., Navas-Acien, A., Schilling, K., & Basu, A. (2025). Isotopic Fractionation of Natural Uranium in Mice as a Potential Biomarker of Renal Accumulation. Environmental Science & Technology, 59(28), 14279–14289. https://doi.org/10.1021/acs.est.5c03403
Authors:
Catherine M Lucey
Brandon L Pearson
Kathryn DeSantis
Jeff Goldsmith
Alex N Halliday
Ana Navas-Acien
Kathrin Schilling
Anirban Basu
Affiliated Authors:
Catherine M Lucey
Brandon L Pearson
Kathryn DeSantis
Jeff Goldsmith
Ana Navas-Acien
Kathrin Schilling
Anirban Basu
Columbia Affiliation:
Subjects:
Uranium (MeSH)
Kidney (MeSH)
Author Keywords:
uranium
isotopes
biomarker
kidney
fractionation
mice
Publication Type:
Article
Unique ID:
10.1021/acs.est.5c03403
PMID:
40653989
DOI:
10.1021/acs.est.5c03403
Journal:
Environmental Science and Technology
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View Web of Science Record

Record Created:

The relationship between chronic air pollution exposure, neighborhood environmental vulnerability, and adverse COVID-19 morbidities among hospitalized New York City residents

Kannoth, S., Zhang, C., Shafiq, M., Albrecht, S. S., Azan, A., Chambers, E. C., Qian, M., Sheffield, P. E., Thompson, A., Woo Baidal, J. A., Lovinsky-Desir, S., & Stingone, J. A. (2025). The relationship between chronic air pollution exposure, neighborhood environmental vulnerability, and adverse COVID-19 morbidities among hospitalized New York City residents. Environment International, 202, 109660. https://doi.org/10.1016/j.envint.2025.109660
Authors:
Sneha Kannoth
Cong Zhang
Mehr Shafiq
Sandra S Albrecht
Alexander Azan
Earle C Chambers
Min Qian
Perry E Sheffield
Azure Thompson
Jennifer A Woo Baidal
Stephanie Lovinsky-Desir
Jeanette A Stingone
Affiliated Authors:
Sneha Kannoth
Cong Zhang
Mehr Shafiq
Sandra S Albrecht
Min Qian
Stephanie Lovinsky-Desir
Jeanette A Stingone
Columbia Affiliation:
Author Keywords:
covid-19 morbidities
environmental vulnerability
health disparities
long-term air pollution
social vulnerability
nitrogen dioxide
ozone
air pollutants
particulate matter
air quality
covid-19
health risks
hospitals
public health
respiratory mechanics
risk assessment
risk perception
covid-19 morbidity
neighbourhood
no 2
pm 2.5
social factor
structural factor
nitrogen oxides
black carbon
atmospheric pollution
neighborhood
pneumonia
pollution exposure
vulnerability
acute respiratory distress syndrome
adult
aged
air pollution
article
artificial ventilation
asthma
body mass
climate change
cohort analysis
community
coronavirus disease 2019
diabetes mellitus
dialysis
environmental exposure
ethnic group
female
health disparity
hospitalization
household
household income
human
humidity
hypertension
hypoxemia
hypoxemic respiratory failure
intensive care
length of stay
major clinical study
male
middle aged
morbidity
obesity
particulate matter 2.5
pollution
prevalence
race
resident
respiratory failure
risk factor
sensitivity analysis
smoking
social determinants of health
social status
socioeconomics
temperature
underweight
adverse event
air pollutant
epidemiology
neighborhood characteristic
new york
residence characteristics
severe acute respiratory syndrome coronavirus 2
new york [new york (stt)]
new york [united states]
united states
humans
neighborhood characteristics
new york city
sars-cov-2
Grants:
K01DK107791 (NIH – National Institute of Diabetes and Digestive and Kidney Diseases)
Publication Type:
Article
Unique ID:
10.1016/j.envint.2025.109660
PMID:
40651278
DOI:
10.1016/j.envint.2025.109660
Journal:
Environment International
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
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View Scopus Record

Record Created:

Suicidal ideation in adults with opioid use disorder treated with buprenorphine-naloxone versus extended-release naltrexone

Rizk, M. M., Stanley, B., Choo, T.-H., Pavlicova, M., Scodes, J. M., Rotrosen, J., & Nunes, E. V. (2025). Suicidal ideation in adults with opioid use disorder treated with buprenorphine-naloxone versus extended-release naltrexone. The American Journal of Drug and Alcohol Abuse, 1–9. https://doi.org/10.1080/00952990.2025.2524110
Authors:
Mina M Rizk
Barbara Stanley
Tse-Hwei Choo
Martina Pavlicova
Jennifer M Scodes
John Rotrosen
Edward V Nunes
Affiliated Authors:
Barbara Stanley
Martina Pavlicova
Edward V Nunes
Columbia Affiliation:
Author Keywords:
buprenorphine
naltrexone
opioid use disorder
suicidal ideation
Grants:
R25MH129256 (NIH – National Institute of Mental Health)
U10DA013034 (NIH – National Institute On Drug Abuse)
U10DA013035 (NIH – National Institute On Drug Abuse)
U10DA013045 (NIH – National Institute On Drug Abuse)
U10DA013046 (NIH – National Institute On Drug Abuse)
U10DA013714 (NIH – National Institute On Drug Abuse)
U10DA013720 (NIH – National Institute On Drug Abuse)
U10DA013732 (NIH – National Institute On Drug Abuse)
U10DA015831 (NIH – National Institute On Drug Abuse)
U10DA015833 (NIH – National Institute On Drug Abuse)
UG1DA013034 (NIH – National Institute On Drug Abuse)
UG1DA013035 (NIH – National Institute On Drug Abuse)
UG1DA013714 (NIH – National Institute On Drug Abuse)
UG1DA013732 (NIH – National Institute On Drug Abuse)
Publication Type:
Article
Unique ID:
10.1080/00952990.2025.2524110
PMID:
40643356
DOI:
10.1080/00952990.2025.2524110
Journal:
American Journal of Drug and Alcohol Abuse
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Unveiling non-small cell lung cancer treatment effect heterogeneity: a comparative analysis of statistical methods

Lavery, J. A., Chen, Y., Panageas, K. S., & Wang, Y. (2025). Unveiling non-small cell lung cancer treatment effect heterogeneity: a comparative analysis of statistical methods. JNCI: Journal of the National Cancer Institute. https://doi.org/10.1093/jnci/djaf176
Authors:
Jessica A Lavery
Yuan Chen
Katherine S Panageas
Yuanjia Wang
Affiliated Authors:
Jessica A Lavery
Yuanjia Wang
Columbia Affiliation:
Author Keywords:
heterogeneous treatment effects
clinico-genomics
survival analysis
time-to-event endpoints
Publication Type:
Article
Unique ID:
10.1093/jnci/djaf176
PMID:
40637678
DOI:
10.1093/jnci/djaf176
Journal:
Journal of the National Cancer Institute
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Proteomic discovery analysis of quantitatively assessed emphysema in the general population. The MESA Lung Study

Guzman, D. E., Ruvuna, L., Guo, C. J., Sun, Y., Pratte, K. A., Manichaikul, A. W., Kim, J. S., Post, W. S., Bertoni, A. G., Allen, N. B., Watson, K. E., Pankow, J. S., Hoffman, E. A., Dubin, R. F., Deo, R., Barjaktarevic, I. Z., Bleecker, E. R., Cooper, C. B., Ortega, V. E., … Barr, R. G. (2025). Proteomic discovery analysis of quantitatively assessed emphysema in the general population. The MESA Lung Study. Respiratory Research, 26(1). https://doi.org/10.1186/s12931-025-03312-8
Authors:
Daniel E Guzman
Lisa Ruvuna
Claire J Guo
Yifei Sun
Katherine A Pratte
Ani W Manichaikul
John S Kim
Wendy S Post
Alain G Bertoni
Norrina B Allen
Karol E Watson
James S Pankow
Eric A Hoffman
Ruth F Dubin
Rajat Deo
Igor Z Barjaktarevic
Eugene R Bleecker
Christopher B Cooper
Victor E Ortega
Annette T Hastie
Robert Paine
James Michael Wells
Jeffrey L Curtis
Edwin K Silverman
Prescott G Woodruff
Christine Kim Garcia
Jerome I Rotter
Russell P Bowler
Peter Ganz
R Graham Barr
Affiliated Authors:
Daniel E Guzman
Yifei Sun
John S Kim
Christine Kim Garcia
R Graham Barr
Columbia Affiliation:
Subjects:
Standardisation and Management of COPD (OpenAlex Topic)
Mechanical Ventilation in Respiratory Failure and ARDS (OpenAlex Topic)
Proteomics (MeSH)
Pulmonary Emphysema (MeSH)
Population Surveillance (MeSH)
Lung (MeSH)
Author Keywords:
proteomics
biomarkers
emphysema
Publication Type:
Article
Unique ID:
10.1186/s12931-025-03312-8
PMID:
40616090
DOI:
10.1186/s12931-025-03312-8
Journal:
Respiratory Research
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View Web of Science Record
View Scopus Record
View OpenAlex Record

Record Created:

Esophageal Circumferential Dose-Length Histogram Parameters to Predict Dysphagia in Patients Receiving Thoracic Radiation Therapy: A Single-Institution Experience

Brown, A., Hu, C., Ke, S., Han, P., Hales, R., McNutt, T., Li, S., Snyder, C., Lee, S., & Voong, K. R. (2025). Esophageal Circumferential Dose-Length Histogram Parameters to Predict Dysphagia in Patients Receiving Thoracic Radiation Therapy: A Single-Institution Experience. Advances in Radiation Oncology, 10(8), 101807. https://doi.org/10.1016/j.adro.2025.101807
Authors:
Andrea Brown
Chen Hu
Suqi Ke
Peijin Han
Russell Hales
Todd McNutt
Siyao Li
Claire Snyder
Shing Lee
Khinh Ranh Voong
Affiliated Authors:
Shing Lee
Columbia Affiliation:
Author Keywords:
antineoplastic agent
adult
advanced cancer
aged
article
cancer radiotherapy
chemoradiotherapy
cohort analysis
controlled study
disease severity
dose length histogram
dysphagia
esophagitis
esophagus
female
histogram
human
intensity modulated radiation therapy
major clinical study
male
non small cell lung cancer
patient-reported outcome
predictive value
radiation dose
radiation exposure
radiological parameters
retrospective study
Publication Type:
Article
Unique ID:
10.1016/j.adro.2025.101807
PMID:
40611876
DOI:
10.1016/j.adro.2025.101807
Journal:
Advances in Radiation Oncology
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View Web of Science Record
View Scopus Record

Record Created:

The mitochondrial disease biomarker GDF15 is dynamic, quantifiable in saliva, and correlates with disease severity

Huang, Q., Trumpff, C., Monzel, A. S., Rausser, S., Devine, J., Liu, C. C., Kelly, C., Kurade, M., Li, S., Engelstad, K., Tanji, K., Lauriola, V., Wang, T., Wang, S., Sloan, R., Juster, R.-P., Hirano, M., & Picard, M. (2025). The mitochondrial disease biomarker GDF15 is dynamic, quantifiable in saliva, and correlates with disease severity. Molecular Genetics and Metabolism, 145(4), 109179. https://doi.org/10.1016/j.ymgme.2025.109179
Authors:
Qiuhan Huang
Caroline Trumpff
Anna S Monzel
Shannon Rausser
Jack Devine
Cynthia C Liu
Catherine Kelly
Mangesh Kurade
Shufang Li
Kris Engelstad
Kurenai Tanji
Vincenzo Lauriola
Tian Wang
Shuang Wang
Richard Sloan
Robert-Paul Juster
Michio Hirano
Martin Picard
Affiliated Authors:
Qiuhan Huang
Caroline Trumpff
Anna S Monzel
Shannon Rausser
Jack Devine
Cynthia C Liu
Catherine Kelly
Mangesh Kurade
Shufang Li
Kris Engelstad
Kurenai Tanji
Vincenzo Lauriola
Tian Wang
Shuang Wang
Richard Sloan
Michio Hirano
Martin Picard
Columbia Affiliation:
Subjects:
Growth Differentiation Factor 15 (MeSH)
Saliva (MeSH)
Mitochondrial Diseases (MeSH)
Author Keywords:
biomarkers
dna, mitochondrial
gdf15 protein, human
growth differentiation factor 15
mitochondrial dna
biological marker
acute stress
adult
age
arousal
article
blood sampling
clinical article
cohort analysis
controlled study
disease severity
disorders of mitochondrial functions
female
functional status
human
male
mental stress
neurologic disease
oxidative phosphorylation
protein expression
saliva
salivary gland
secretory cell
sensitivity and specificity
aged
blood
chemistry
diagnosis
genetics
metabolism
middle aged
mitochondrion
pathology
severity of illness index
humans
mitochondria
mitochondrial diseases
Publication Type:
Article
Unique ID:
10.1016/j.ymgme.2025.109179
PMID:
40602037
DOI:
10.1016/j.ymgme.2025.109179
Journal:
Molecular Genetics and Metabolism
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View Web of Science Record
View Scopus Record

Record Created:

Global and Episode-Specific Prediction of Recurrent Events Using Longitudinal Health Informatics Data

Sun, Y., Chiou, S. H., & Huang, C.-Y. (2025). Global and Episode-Specific Prediction of Recurrent Events Using Longitudinal Health Informatics Data. Journal of the American Statistical Association, 1–13. https://doi.org/10.1080/01621459.2025.2497569
Authors:
Yifei Sun
Sy Han Chiou
Chiung-Yu Huang
Affiliated Authors:
Yifei Sun
Columbia Affiliation:
Author Keywords:
dynamic risk prediction
ensemble
gap time
medical records
random forest
Publication Type:
Article
Unique ID:
10.1080/01621459.2025.2497569
PMID:
40842682
DOI:
10.1080/01621459.2025.2497569
Journal:
Journal of the American Statistical Association
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record

Record Created:

Newborn mitochondrial DNA copy number is associated with changes to DNA methylation that persist into childhood and are associated with cognitive development

Kupsco, A., Heiss, J. A., Sanchez-Guerra, M., Estrada-Gutierrez, G., Lesseur, C., Hernández, C., Bloomquist, T. R., Abigail, G., Guo, J., Wang, S., Herbstman, J. B., Just, A. C., Téllez-Rojo, M. M., Wright, R. O., & Baccarelli, A. A. (2025). Newborn mitochondrial DNA copy number is associated with changes to DNA methylation that persist into childhood and are associated with cognitive development. Clinical Epigenetics, 17(1). https://doi.org/10.1186/s13148-025-01896-y
Authors:
Allison Kupsco
Jonathan A Heiss
Marco Sanchez-Guerra
Guadalupe Estrada-Gutierrez
Corina Lesseur
Carmen Hernández
Tessa R Bloomquist
Gaylord Abigail
Jia Guo
Shuang Wang
Julie B Herbstman
Allan C Just
Martha M Téllez-Rojo
Robert O Wright
Andrea A Baccarelli
Affiliated Authors:
Allison Kupsco
Tessa R Bloomquist
Gaylord Abigail
Jia Guo
Shuang Wang
Julie B Herbstman
Columbia Affiliation:
Subjects:
DNA Methylation (MeSH)
DNA, Mitochondrial (MeSH)
DNA Copy Number Variations (MeSH)
Cognition (MeSH)
Author Keywords:
mitochondria
mtdna
dna methylation
neurodevelopment
developmental origins of health and disease
Publication Type:
Article
Unique ID:
10.1186/s13148-025-01896-y
PMID:
40605063
DOI:
10.1186/s13148-025-01896-y
Journal:
Clinical Epigenetics
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
View Web of Science Record

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TransferTWAS: A transfer learning framework for cross-tissue transcriptome-wide association study

Lai, D., Wang, H., Gu, T., Wu, S., Liu, D. J., Sham, P. C., & Zhang, Y. D. (2025). TransferTWAS: A transfer learning framework for cross-tissue transcriptome-wide association study. The American Journal of Human Genetics. https://doi.org/10.1016/j.ajhg.2025.06.006
Authors:
Daoyuan Lai
Han Wang
Tian Gu
Siqi Wu
Dajiang J Liu
Pak Chung Sham
Yan Dora Zhang
Affiliated Authors:
Tian Gu
Columbia Affiliation:
Author Keywords:
eqtls
genetic association
genome-wide association studies
transcriptome-wide association study
transfer learning
cholesterol, ldl
low density lipoprotein cholesterol
transcriptome
article
computer simulation
conceptual framework
data processing
gene expression
gene expression regulation
genetic trait
genome-wide association study
information processing
learning algorithm
measurement accuracy
prediction
tissues
transcriptome wide association study
transfer of learning
unified test for molecular signature
antibody specificity
biological model
gene expression profiling
genetics
human
machine learning
multifactorial inheritance
procedures
quantitative trait locus
single nucleotide polymorphism
humans
models, genetic
organ specificity
polymorphism, single nucleotide
quantitative trait loci
Publication Type:
Article
Unique ID:
10.1016/j.ajhg.2025.06.006
PMID:
40592330
DOI:
10.1016/j.ajhg.2025.06.006
Journal:
American Journal of Human Genetics
Publication Date:
Data Source:
PubMed
Source Link:
View PubMed Record
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View Scopus Record

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α-separability and adjustable combination of amplitude and phase model for functional data

Wang, T., & Ding, J. (2024). α-separability and adjustable combination of amplitude and phase model for functional data. Journal of the Royal Statistical Society Series B: Statistical Methodology, 87(3), 746–771. https://doi.org/10.1093/jrsssb/qkae112
Authors:
Tian Wang
Jimin Ding
Affiliated Authors:
Tian Wang
Columbia Affiliation:
Author Keywords:
fréchet mean
functional data analysis
identifiability
joint model
separability
variation decomposition
Publication Type:
Article
Unique ID:
10.1093/jrsssb/qkae112
DOI:
10.1093/jrsssb/qkae112
Journal:
Journal of the Royal Statistical Society, Series B: Statistical Methodology
Publication Date:
Data Source:
Scopus
Source Link:
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Evolution of histology of new cutaneous squamous cell carcinomas over time in solid organ transplant recipients

Trager, M. H., Gordon, E. R., Breneman, A., LeWitt, T., Han, J., Leu, C.-S., Kawa, N., Husain, S., El-Ashmawy, M., & Samie, F. H. (2025). Evolution of histology of new cutaneous squamous cell carcinomas over time in solid organ transplant recipients. Archives of Dermatological Research, 317(1). https://doi.org/10.1007/s00403-025-04317-5
Authors:
Megan H. Trager
Emily R. Gordon
Alyssa Breneman
Tessa LeWitt
Nisrine Kawa
Sameera Husain
Faramarz H. Samie
Jiying Han
Cheng-Shiun Leu
Mariam El-Ashmawy
Affiliated Authors:
Megan H. Trager
Emily R. Gordon
Alyssa Breneman
Tessa LeWitt
Nisrine Kawa
Sameera Husain
Faramarz H. Samie
Jiying Han
Cheng-Shiun Leu
Mariam El-Ashmawy
Columbia Affiliation:
Author Keywords:
squamous cell carcinoma
mortality
transplant
immunosuppression
histology
Publication Type:
Article
Unique ID:
10.1007/s00403-025-04317-5
DOI:
10.1007/s00403-025-04317-5
Journal:
Archives of Dermatological Research
Publication Date:
Data Source:
Web of Science
Source Link:
View Web of Science Record

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CSV