Department of Genetics and Development

Displaying 201 - 250 of 413CSV
Gaspary, A., Laureau, R., Dyatel, A., Dursuk, G., Simon, Y., & Berchowitz, L. E. (2023). Rie1 and Sgn1 form an RNA-binding complex that enforces the meiotic entry cell fate decision. Journal of Cell Biology, 222(11). https://doi.org/10.1083/jcb.202302074
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Ottoz, D. S., Tang, L. C., Dyatel, A. E., Jovanovic, M., & Berchowitz, L. E. (2023). Assembly and function of the amyloid‐like translational repressor Rim4 is coupled with nutrient conditions. The EMBO Journal, 42(23). Portico. https://doi.org/10.15252/embj.2022113332
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De Simone, P., Bal, E., Holmes, A., Hilton, L., Basso, K., Soni, R. K., Morin, R., Dalla-Favera, R., & Pasqualucci, L. (2023). BTG2 Super-Enhancer Mutations Disrupt TFAP4 Binding and Deregulate BTG2 Expression in Diffuse Large B-Cell Lymphoma. Blood, 142(Supplement 1), 523–523. https://doi.org/10.1182/blood-2023-190230
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Minns, H., Padilla, O., Wei, H.-J., Gartrell, R. D., Webster-Carrion, A., Tazhibi, M., McQuillan, N., Zhang, X., Gallitto, M., Yeh, R., Zhang, Z., Hei, T., Szalontay, L., Pavisic, J., Garty, G., Garvin, J., Canoll, P., Vanpouille-Box, C., Menon, V., … Wu, C.-C. (2023). 53 Inducing immune response with FLASH and conventional radiation in diffuse midline glioma (DMG). Regular and Young Investigator Award Abstracts. https://doi.org/10.1136/jitc-2023-sitc2023.0053
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Qayum, N., Uddin, M. N., Khan, W., Un Nabi, H., Taj-Ud-Din, Suleman, M., Ur Rahman, H., Ali, I., Hassan deif, A., Almeer, R., & Ullah, F. (2023). The outbreak of migratory goat’s brucellosis in the Swat ecosystem of Khyber Pakhtunkhwa. Onderstepoort Journal of Veterinary Research, 90(1). https://doi.org/10.4102/ojvr.v90i1.2079
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Kasbekar, M., Mitchell, C. A., Proven, M. A., & Passegué, E. (2023). Hematopoietic stem cells through the ages: A lifetime of adaptation to organismal demands. Cell Stem Cell, 30(11), 1403–1420. https://doi.org/10.1016/j.stem.2023.09.013
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Miura, A., Sarmah, H., Tanaka, J., Hwang, Y., Sawada, A., Shimamura, Y., Otoshi, T., Kondo, Y., Fang, Y., Shimizu, D., Ninish, Z., Suer, J. L., Dubois, N. C., Davis, J., Toyooka, S., Wu, J., Que, J., Hawkins, F. J., Lin, C.-S., & Mori, M. (2023). Conditional blastocyst complementation of a defective Foxa2 lineage efficiently promotes the generation of the whole lung. ELife, 12. CLOCKSS. https://doi.org/10.7554/elife.86105
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Dugger, S. A., Dhindsa, R. S., Sampaio, G. D. A., Ressler, A. K., Rafikian, E. E., Petri, S., Letts, V. A., Teoh, J., Ye, J., Colombo, S., Peng, Y., Yang, M., Boland, M. J., Frankel, W. N., & Goldstein, D. B. (2023). Neurodevelopmental deficits and cell-type-specific transcriptomic perturbations in a mouse model of HNRNPU haploinsufficiency. PLOS Genetics, 19(10), e1010952. https://doi.org/10.1371/journal.pgen.1010952
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Mohite, P., Nahar, D., Pawara, R., Alqahtani, T., Eldin, S. M., Mukherje, N., Rahman Mohammad Said Al-Tawaha, A., Iqbal, R., Bawazeer, S., & Ali, I. (2023). Triazolopyridine, a leitmotif of synthetic methods and pharmacological attributes: An extensive review. Arabian Journal of Chemistry, 16(10), 105181. https://doi.org/10.1016/j.arabjc.2023.105181
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Kaeberlein, T. L., Green, A. S., Haddad, G., Hudson, J., Isman, A., Nyquist, A., Rosen, B. S., Suh, Y., Zalzala, S., Zhang, X., Blagosklonny, M. V., An, J. Y., & Kaeberlein, M. (2023). Evaluation of off-label rapamycin use to promote healthspan in 333 adults. GeroScience, 45(5), 2757–2768. https://doi.org/10.1007/s11357-023-00818-1
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Li, A. M., He, B., Karagiannis, D., Li, Y., Jiang, H., Srinivasan, P., Ramirez, Y., Zhou, M.-N., Curtis, C., Gruber, J. J., Lu, C., Rankin, E. B., & Ye, J. (2023). Serine starvation silences estrogen receptor signaling through histone hypoacetylation. Proceedings of the National Academy of Sciences, 120(38). https://doi.org/10.1073/pnas.2302489120
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Noreen, S., Yaseen, T., Iqbal, J., Abbasi, B. A., Farouk Elsadek, M., Eldin, S. M., Ijaz, S., & Ali, I. (2023). Morphological and Molecular Characterizations of Arbuscular Mycorrhizal Fungi and Their Influence on Soil Physicochemical Properties and Plant Nutrition. ACS Omega, 8(36), 32468–32482. https://doi.org/10.1021/acsomega.3c02489
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Ko, K.-P., Huang, Y., Zhang, S., Zou, G., Kim, B., Zhang, J., Jun, S., Martin, C., Dunbar, K. J., Efe, G., Rustgi, A. K., Nakagawa, H., & Park, J.-I. (2023). Key Genetic Determinants Driving Esophageal Squamous Cell Carcinoma Initiation and Immune Evasion. Gastroenterology, 165(3), 613-628.e20. https://doi.org/10.1053/j.gastro.2023.05.030
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Sachan, R. S. K., Mistry, V., Dholaria, M., Rana, A., Devgon, I., Ali, I., Iqbal, J., Eldin, S. M., Mohammad Said Al-Tawaha, A. R., Bawazeer, S., Dutta, J., & Karnwal, A. (2023). Overcoming Mycobacterium tuberculosis Drug Resistance: Novel Medications and Repositioning Strategies. ACS Omega, 8(36), 32244–32257. https://doi.org/10.1021/acsomega.3c02563
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Trujillo, S., Wetmore, J. B., Camarillo, I. A., Misiewicz, S., May, H., Choi, H., Siegel, K., Chung, W. K., Phelan, J. C., Yang, L. H., Leu, C., Bergner, A. L., & Ottman, R. (2023). Knowledge and beliefs about epilepsy genetics among Hispanic and non‐Hispanic patients. Epilepsia, 64(9), 2443–2453. Portico. https://doi.org/10.1111/epi.17701
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Liu, C.-P., Yu, Z., Xiong, J., Hu, J., Song, A., Ding, D., Yu, C., Yang, N., Wang, M., Yu, J., Hou, P., Zeng, K., Li, Z., Zhang, Z., Zhang, X., Li, W., Zhang, Z., Zhu, B., Li, G., & Xu, R.-M. (2023). Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1. Science, 381(6660). https://doi.org/10.1126/science.add8673
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Abini-Agbomson, S., Gretarsson, K., Shih, R. M., Hsieh, L., Lou, T., De Ioannes, P., Vasilyev, N., Lee, R., Wang, M., Simon, M. D., Armache, J.-P., Nudler, E., Narlikar, G., Liu, S., Lu, C., & Armache, K.-J. (2023). Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1. Molecular Cell, 83(16), 2872-2883.e7. https://doi.org/10.1016/j.molcel.2023.07.020
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Thomas, J. F., Valencia-Sánchez, M. I., Tamburri, S., Gloor, S. L., Rustichelli, S., Godínez-López, V., De Ioannes, P., Lee, R., Abini-Agbomson, S., Gretarsson, K., Burg, J. M., Hickman, A. R., Sun, L., Gopinath, S., Taylor, H. F., Sun, Z.-W., Ezell, R. J., Vaidya, A., Meiners, M. J., … Armache, K.-J. (2023). Structural basis of histone H2A lysine 119 deubiquitination by Polycomb repressive deubiquitinase BAP1/ASXL1. Science Advances, 9(32). https://doi.org/10.1126/sciadv.adg9832
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Yang, X., Wang, Z., Zandkarimi, F., Liu, Y., Duan, S., Li, Z., Kon, N., Zhang, Z., Jiang, X., Stockwell, B. R., & Gu, W. (2023). Regulation of VKORC1L1 is critical for p53-mediated tumor suppression through vitamin K metabolism. Cell Metabolism, 35(8), 1474-1490.e8. https://doi.org/10.1016/j.cmet.2023.06.014
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Ameen, F., Mumtaz, S., Ali, B., Hussain, I., Hafeez, A., Gul, A., Elsharkawy, M. M., Hashim, T. A., Yasin, G., Khan, M. N., Ali, I., Eldin, S. M., Rashwan, M. A., Elansary, H. O., & Ali, S. (2023). The impact of Cu-polluted and organic soil on the fibrous plant; insights into plant growth promotion, antioxidant defences system, and oxidative stress. Functional Plant Biology, 50(8), 623–632. https://doi.org/10.1071/fp23027
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Shao, Z., Lee, B. J., Zhang, H., Lin, X., Li, C., Jiang, W., Chirathivat, N., Gershik, S., Shen, M. M., Baer, R., & Zha, S. (2023). Inactive PARP1 causes embryonic lethality and genome instability in a dominant-negative manner. Proceedings of the National Academy of Sciences, 120(31). https://doi.org/10.1073/pnas.2301972120
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Vaitsiankova, A., Thakar, T., & Ciccia, A. (2023). Base-editing screens illuminate variant effects in human hematopoiesis. Cell Reports Methods, 3(7), 100541. https://doi.org/10.1016/j.crmeth.2023.100541
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Kornberg, A., Botella, T., Moon, C. S., Rao, S., Gelbs, J., Cheng, L., Miller, J., Bacarella, A. M., García-Vilas, J. A., Vargas, J., Yu, X., Krupska, I., Bush, E., Garcia-Carrasquillo, R., Lebwohl, B., Krishnareddy, S., Lewis, S., Green, P. H. R., Bhagat, G., … Han, A. (2023). Gluten induces rapid reprogramming of natural memory αβ and γδ intraepithelial T cells to induce cytotoxicity in celiac disease. Science Immunology, 8(85). https://doi.org/10.1126/sciimmunol.adf4312
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Min, J., Zhao, J., Zagelbaum, J., Lee, J., Takahashi, S., Cummings, P., Schooley, A., Dekker, J., Gottesman, M. E., Rabadan, R., & Gautier, J. (2023). Mechanisms of insertions at a DNA double-strand break. Molecular Cell, 83(14), 2434-2448.e7. https://doi.org/10.1016/j.molcel.2023.06.016
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Mihaylova, M. M., Chaix, A., Delibegovic, M., Ramsey, J. J., Bass, J., Melkani, G., Singh, R., Chen, Z., Ja, W. W., Shirasu-Hiza, M., Latimer, M. N., Mattison, J. A., Thalacker-Mercer, A. E., Dixit, V. D., Panda, S., & Lamming, D. W. (2023). When a calorie is not just a calorie: Diet quality and timing as mediators of metabolism and healthy aging. Cell Metabolism, 35(7), 1114–1131. https://doi.org/10.1016/j.cmet.2023.06.008
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Saeed, S., Ullah, A., Ullah, S., Elshikh, M. S., Noor, J., Eldin, S. M., Zeng, F., Amin, F., Ali, M. A., & Ali, I. (2023). Salicylic Acid and α-Tocopherol Ameliorate Salinity Impact on Wheat. ACS Omega, 8(29), 26122–26135. https://doi.org/10.1021/acsomega.3c02166
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Lee, E. Y., Dai, Z., Jaiswal, A., Wang, E. H. C., Anandasabapathy, N., & Christiano, A. M. (2023). Functional interrogation of lymphocyte subsets in alopecia areata using single-cell RNA sequencing. Proceedings of the National Academy of Sciences, 120(29). https://doi.org/10.1073/pnas.2305764120
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Aouz, A., Khan, I., Chattha, M. B., Ahmad, S., Ali, M., Ali, I., Ali, A., Alqahtani, F. M., Hashem, M., Albishi, T. S., Qari, S. H., Chatta, M. U., & Hassan, M. U. (2023). Silicon Induces Heat and Salinity Tolerance in Wheat by Increasing Antioxidant Activities, Photosynthetic Activity, Nutrient Homeostasis, and Osmo-Protectant Synthesis. Plants, 12(14), 2606. https://doi.org/10.3390/plants12142606
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Dunbar, K. J., Karakasheva, T. A., Tang, Q., Efe, G., Lin, E. W., Harris, M., Sahu, V., Sachdeva, U. M., Hu, J., Klein-Szanto, A. J., Henick, B., Diehl, J. A., Nakagawa, H., & Rustgi, A. K. (2023). Tumor-Derived CCL5 Recruits Cancer-Associated Fibroblasts and Promotes Tumor Cell Proliferation in Esophageal Squamous Cell Carcinoma. Molecular Cancer Research, 21(7), 741–752. https://doi.org/10.1158/1541-7786.mcr-22-0872
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Kyzer, J. L., Noman, M. A. A., Cuellar, R. A. D., Chung, S. S. W., Maitra, S., Naqvi, T., Hawkinson, J. E., Wolgemuth, D. J., & Georg, G. I. (2023). Investigation of selective retinoic acid receptor alpha antagonist ER‐50891 and related analogs for male contraception. Archiv Der Pharmazie, 356(7). Portico. https://doi.org/10.1002/ardp.202300031
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Vijg, J., Schumacher, B., Abakir, A., Antonov, M., Bradley, C., Cagan, A., Church, G., Gladyshev, V. N., Gorbunova, V., Maslov, A. Y., Reik, W., Sharifi, S., Suh, Y., & Walsh, K. (2023). Mitigating age-related somatic mutation burden. Trends in Molecular Medicine, 29(7), 530–540. https://doi.org/10.1016/j.molmed.2023.04.002
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Shih, J., Sarmashghi, S., Zhakula-Kostadinova, N., Zhang, S., Georgis, Y., Hoyt, S. H., Cuoco, M. S., Gao, G. F., Spurr, L. F., Berger, A. C., Ha, G., Rendo, V., Shen, H., Meyerson, M., Cherniack, A. D., Taylor, A. M., & Beroukhim, R. (2023). Cancer aneuploidies are shaped primarily by effects on tumour fitness. Nature, 619(7971), 793–800. https://doi.org/10.1038/s41586-023-06266-3
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Schvartzman, J.-M., Forsyth, G., Walch, H., Chatila, W., Taglialatela, A., Lee, B. J., Zhu, X., Gershik, S., Cimino, F. V., Santella, A., Menghrajani, K., Ciccia, A., Koche, R., Sánchez-Vega, F., Zha, S., & Thompson, C. B. (2023). Oncogenic IDH mutations increase heterochromatin-related replication stress without impacting homologous recombination. Molecular Cell, 83(13), 2347-2356.e8. https://doi.org/10.1016/j.molcel.2023.05.026
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Kimble, M. T., Johnson, M. J., Nester, M. R., & Symington, L. S. (2023). Long-range DNA end resection supports homologous recombination by checkpoint activation rather than extensive homology generation. ELife, 12. CLOCKSS. https://doi.org/10.7554/elife.84322
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Zhu, Y., Tazearslan, C., Rosenfeld, M. G., Fiser, A., & Suh, Y. (2023). Identification and functional validation of an enhancer variant in the 9p21.3 locus associated with glaucoma risk and elevated expression of p16INK4a. Aging Cell, 22(9). Portico. https://doi.org/10.1111/acel.13908
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Anwar, S., Ali, A., Ullah, Z., Binjawhar, D. N., Sher, H., Ali, R., Iqbal, R., Ali, B., & Ali, I. (2023). The Impact of Trichoderma harzianum Together with Copper and Boron on Wheat Yield. ACS Agricultural Science & Technology, 3(6), 517–527. https://doi.org/10.1021/acsagscitech.3c00076
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Saeed, A., Ali, H., Yasmin, A., Baig, M., Ullah, A., Kazmi, A., Ahmed, M. A., Albadrani, G. M., El-Demerdash, F. M., Bibi, M., Abdel-Daim, M. M., Ali, I., & Hussain, S. (2023). Unveiling the Antibiotic Susceptibility and Antimicrobial Potential of Bacteria from Human Breast Milk of Pakistani Women: An Exploratory Study. BioMed Research International, 2023(1). Portico. https://doi.org/10.1155/2023/6399699
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Kakar, H. A., Ullah, S., Shah, W., Ali, B., Satti, S. Z., Ullah, R., Muhammad, Z., Eldin, S. M., Ali, I., Alwahibi, M. S., Elshikh, M. S., & Ercisli, S. (2023). Seed Priming Modulates Physiological and Agronomic Attributes of Maize (Zea mays L.) under Induced Polyethylene Glycol Osmotic Stress. ACS Omega, 8(25), 22788–22808. https://doi.org/10.1021/acsomega.3c01715
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Rahman, S., Lan, X., Terranova, C., El-Kholdi, R., Yilmaz, O. H., & Cheng, C.-W. (2023). Epigenetic and Transcriptional Dynamics of Notch Program in Intestinal Differentiation. Intestinal Differentiated Cells, 77–88. https://doi.org/10.1007/978-1-0716-3076-1_7
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DeBlasi, J. M., Falzone, A., Caldwell, S., Prieto-Farigua, N., Prigge, J. R., Schmidt, E. E., Chio, I. I. C., Karreth, F. A., & DeNicola, G. M. (2023). Distinct Nrf2 Signaling Thresholds Mediate Lung Tumor Initiation and Progression. Cancer Research, 83(12), 1953–1967. https://doi.org/10.1158/0008-5472.can-22-3848
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Sumbal, S., Ali, A., Nasser Binjawhar, D., Ullah, Z., Eldin, S. M., Iqbal, R., Sher, H., & Ali, I. (2023). Comparative Effects of Hydropriming and Iron Priming on Germination and Seedling Morphophysiological Attributes of Stay-Green Wheat. ACS Omega, 8(25), 23078–23088. https://doi.org/10.1021/acsomega.3c02359
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Singh, P., Gollapalli, K., Mangiola, S., Schranner, D., Yusuf, M. A., Chamoli, M., Shi, S. L., Lopes Bastos, B., Nair, T., Riermeier, A., Vayndorf, E. M., Wu, J. Z., Nilakhe, A., Nguyen, C. Q., Muir, M., Kiflezghi, M. G., Foulger, A., Junker, A., Devine, J., … Yadav, V. K. (2023). Taurine deficiency as a driver of aging. Science, 380(6649). https://doi.org/10.1126/science.abn9257
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Tshering, L. F., Luo, F., Russ, S., Szenk, M., Rubel, D., Tutuska, K., Rail, J. G., Balázsi, G., Shen, M. M., & Talos, F. (2023). Immune mechanisms shape the clonal landscape during early progression of prostate cancer. Developmental Cell, 58(12), 1071-1086.e8. https://doi.org/10.1016/j.devcel.2023.04.010
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Aftab, A., Ali, M., Yousaf, Z., Binjawhar, D. N., Hyder, S., Aftab, Z., Maqbool, Z., Shahzadi, Z., Eldin, S. M., Iqbal, R., & Ali, I. (2023). Shelf‐life extension of Fragaria × ananassa Duch. using selenium nanoparticles synthesized from Cassia fistula Linn. leaves. Food Science & Nutrition, 11(6), 3464–3484. Portico. https://doi.org/10.1002/fsn3.3336
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Ahimaz, P., Foltz, J. C., Ross, M. J., Florido, M. E., Sebastin, M., & Yu, J. E. (2023). Exploring the role of genetic counselors in immunology: A study of immunologist and allergist perspectives. The Journal of Allergy and Clinical Immunology: In Practice, 11(6), 1939-1942.e2. https://doi.org/10.1016/j.jaip.2023.01.050
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