Department of Pathology and Cell Biology

Displaying 1051 - 1100 of 1563CSV
Bernardin, A. A., Colombani, S., Rousselot, A., Andry, V., Goumon, Y., Delanoë-Ayari, H., Pasqualin, C., Brugg, B., Jacotot, E. D., Pasquié, J.-L., Lacampagne, A., & Meli, A. C. (2022). Impact of Neurons on Patient-Derived Cardiomyocytes Using Organ-On-A-Chip and iPSC Biotechnologies. Cells, 11(23), 3764. https://doi.org/10.3390/cells11233764
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Cummings, M. J., Bakamutumaho, B., Price, A., Owor, N., Kayiwa, J., Namulondo, J., Byaruhanga, T., Muwanga, M., Nsereko, C., Sameroff, S., Tokarz, R., Wong, W., Shah, S. S., Larsen, M. H., Lipkin, W. I., Lutwama, J. J., & O’Donnell, M. R. (2022). Multidimensional analysis of the host response reveals prognostic and pathogen-driven immune subtypes among adults with sepsis in Uganda. Critical Care, 26(1). https://doi.org/10.1186/s13054-022-03907-3
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Mo, Y., Duan, S., Zhang, X., Hua, X., Zhou, H., Wei, H.-J., Watanabe, J., McQuillan, N., Su, Z., Gu, W., Wu, C.-C., Vakoc, C. R., Hashizume, R., Chang, K., & Zhang, Z. (2022). Epigenome Programming by H3.3K27M Mutation Creates a Dependence of Pediatric Glioma on SMARCA4. Cancer Discovery, 12(12), 2906–2929. https://doi.org/10.1158/2159-8290.cd-21-1492
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Miranda, A. M., Ashok, A., Chan, R. B., Zhou, B., Xu, Y., McIntire, L. B., Area-Gomez, E., Di Paolo, G., Duff, K. E., Oliveira, T. G., & Nuriel, T. (2022). Effects of APOE4 allelic dosage on lipidomic signatures in the entorhinal cortex of aged mice. Translational Psychiatry, 12(1). https://doi.org/10.1038/s41398-022-01881-6
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Xu, Z., Chen, J. J., Mei, Q., Li, Y., & Xu, J. (2022). Expression of 5-hydroxytryptamine 7 receptor in intestinal mucosa correlates with the degree of intestinal inflammation in Crohn’s disease. BMC Gastroenterology, 22(1). https://doi.org/10.1186/s12876-022-02513-5
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Heras, A., Gomi, R., Young, M., Chang, C. L., Wasserman, E., Sharma, A., Wu, W., Gu, J., Balaji, U., White, R., Permaul, P., Janahi, I., Worgall, T. S., & Worgall, S. (2022). Dietary long-chain omega 3 fatty acids modify sphingolipid metabolism to facilitate airway hyperreactivity. Scientific Reports, 12(1). https://doi.org/10.1038/s41598-022-21083-w
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Herbek, S. L., Smithgall, M. C., Murphy, E. A., Schwartz, R. E., Chen, S., Riley, L. E., Stuhlmann, H., Yang, Y. J., & Goswami, R. (2022). Human Maternal-Fetal Interface Cellular Models to Assess Antiviral Drug Toxicity during Pregnancy. Reproductive Medicine, 3(4), 303–319. https://doi.org/10.3390/reprodmed3040024
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Soung, A. L., Vanderheiden, A., Nordvig, A. S., Sissoko, C. A., Canoll, P., Mariani, M. B., Jiang, X., Bricker, T., Rosoklija, G. B., Arango, V., Underwood, M., Mann, J. J., Dwork, A. J., Goldman, J. E., Boon, A. C. M., Boldrini, M., & Klein, R. S. (2022). COVID-19 induces CNS cytokine expression and loss of hippocampal neurogenesis. Brain, 145(12), 4193–4201. https://doi.org/10.1093/brain/awac270
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Argunşah, A. Ö., Erdil, E., Ghani, M. U., Ramiro-Cortés, Y., Hobbiss, A. F., Karayannis, T., Çetin, M., Israely, I., & Ünay, D. (2022). An interactive time series image analysis software for dendritic spines. Scientific Reports, 12(1). https://doi.org/10.1038/s41598-022-16137-y
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Cuppen, E., Elemento, O., Rosenquist, R., Nikic, S., IJzerman, M., Zaleski, I. D., Frederix, G., Levin, L.-Å., Mullighan, C. G., Buettner, R., Pugh, T. J., Grimmond, S., Caldas, C., Andre, F., Custers, I., Campo, E., van Snellenberg, H., Schuh, A., Nakagawa, H., … Jobanputra, V. (2022). Implementation of Whole-Genome and Transcriptome Sequencing Into Clinical Cancer Care. JCO Precision Oncology, 6. https://doi.org/10.1200/po.22.00245
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Teng, S., Zhen, F., Wang, L., Schalchli, J. C., Simko, J., Chen, X., Jin, H., Makinson, C. D., & Peng, Y. (2022). Control of non-REM sleep by ventrolateral medulla glutamatergic neurons projecting to the preoptic area. Nature Communications, 13(1). https://doi.org/10.1038/s41467-022-32461-3
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Su, P.-Y., Lee, W., Zernant, J., Tsang, S. H., Nagasaki, T., Corneo, B., & Allikmets, R. (2022). Establishment of the iPSC line CUIMCi005-A from a patient with Stargardt disease for retinal organoid culture. Stem Cell Research, 65, 102973. https://doi.org/10.1016/j.scr.2022.102973
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Argenziano, M. G., Furnari, J. L., Miller, M. L., Sun, Y., Banu, M. A., Neira, J. A., Snuderl, M., Bruce, J. N., Welch, M., McCormick, P., & Canoll, P. (2022). Thoracic low grade glial neoplasm with concurrent H3 K27M and PTPN11 mutations. Acta Neuropathologica Communications, 10(1). https://doi.org/10.1186/s40478-022-01340-9
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Platzer, K., Sticht, H., Bupp, C., Ganapathi, M., Pereira, E. M., Le Guyader, G., Bilan, F., Henderson, L. B., Lemke, J. R., Taschenberger, H., Brose, N., Abou Jamra, R., & Wojcik, S. M. (2022). De Novo Missense Variants in SLC32A1 Cause a Developmental and Epileptic Encephalopathy Due to Impaired GABAergic Neurotransmission. Annals of Neurology, 92(6), 958–973. Portico. https://doi.org/10.1002/ana.26485
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Lee, S. B., Garofano, L., Ko, A., D’Angelo, F., Frangaj, B., Sommer, D., Gan, Q., Kim, K., Cardozo, T., Iavarone, A., & Lasorella, A. (2022). Regulated interaction of ID2 with the anaphase-promoting complex links progression through mitosis with reactivation of cell-type-specific transcription. Nature Communications, 13(1). https://doi.org/10.1038/s41467-022-29502-2
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Maurer, M. S., Smiley, D., Simsolo, E., Remotti, F., Bustamante, A., Teruya, S., Helmke, S., Einstein, A. J., Lehman, R., Giles, J. T., Kelly, J. W., Tsai, F., Blaner, W. S., Brun, P., Riesenburger, R. I., Kryzanski, J., Varga, C., & Patel, A. R. (2022). Analysis of lumbar spine stenosis specimens for identification of amyloid. Journal of the American Geriatrics Society, 70(12), 3538–3548. Portico. https://doi.org/10.1111/jgs.17976
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Heath, L., Earls, J. C., Magis, A. T., Kornilov, S. A., Lovejoy, J. C., Funk, C. C., Rappaport, N., Logsdon, B. A., Mangravite, L. M., Kunkle, B. W., Martin, E. R., Naj, A. C., Ertekin-Taner, N., Golde, T. E., Hood, L., Price, N. D., Abner, E., Adams, P. M., … Zhao, Y. (2022). Manifestations of Alzheimer’s disease genetic risk in the blood are evident in a multiomic analysis in healthy adults aged 18 to 90. Scientific Reports, 12(1). https://doi.org/10.1038/s41598-022-09825-2
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Boyé, K., Geraldo, L. H., Furtado, J., Pibouin-Fragner, L., Poulet, M., Kim, D., Nelson, B., Xu, Y., Jacob, L., Maissa, N., Agalliu, D., Claesson-Welsh, L., Ackerman, S. L., & Eichmann, A. (2022). Endothelial Unc5B controls blood-brain barrier integrity. Nature Communications, 13(1). https://doi.org/10.1038/s41467-022-28785-9
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den Hollander, A. I., Mullins, R. F., Orozco, L. D., Voigt, A. P., Chen, H.-H., Strunz, T., Grassmann, F., Haines, J. L., Kuiper, J. J. W., Tumminia, S. J., Allikmets, R., Hageman, G. S., Stambolian, D., Klaver, C. C. W., Boeke, J. D., Chen, H., Honigberg, L., Katti, S., Frazer, K. A., … Gorin, M. B. (2022). Systems genomics in age-related macular degeneration. Experimental Eye Research, 225, 109248. https://doi.org/10.1016/j.exer.2022.109248
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Tawalbeh, M., Aburizeg, D., Abu Alragheb, B. O., Alaqrabawi, W. S., Dardas, Z., Srour, L., Altarayra, B. H., Zayed, A. A., El Omari, Z., & Azab, B. (2022). SLC26A4 Phenotypic Variability Influences Intra- and Inter-Familial Diagnosis and Management. Genes, 13(12), 2192. https://doi.org/10.3390/genes13122192
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Anandakumaran, P. N., Ayers, A. G., Muranski, P., Creusot, R. J., & Sia, S. K. (2022). Rapid video-based deep learning of cognate versus non-cognate T cell-dendritic cell interactions. Scientific Reports, 12(1). https://doi.org/10.1038/s41598-021-04286-5
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Oh, J. K., Vargas Del Valle, J. G., Lima de Carvalho, J. R., Sun, Y. J., Levi, S. R., Ryu, J., Yang, J., Nagasaki, T., Emanuelli, A., Rasool, N., Allikmets, R., Sparrow, J. R., Izquierdo, N. J., Duncan, J. L., Mahajan, V. B., & Tsang, S. H. (2022). Expanding the phenotype of TTLL5-associated retinal dystrophy: a case series. Orphanet Journal of Rare Diseases, 17(1). https://doi.org/10.1186/s13023-022-02295-9
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Wu, Z., Trevino, A. E., Wu, E., Swanson, K., Kim, H. J., D’Angio, H. B., Preska, R., Charville, G. W., Dalerba, P. D., Egloff, A. M., Uppaluri, R., Duvvuri, U., Mayer, A. T., & Zou, J. (2022). Graph deep learning for the characterization of tumour microenvironments from spatial protein profiles in tissue specimens. Nature Biomedical Engineering, 6(12), 1435–1448. https://doi.org/10.1038/s41551-022-00951-w
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Kim, S., Leong, A., Kim, M., & Yang, H. W. (2022). CDK4/6 initiates Rb inactivation and CDK2 activity coordinates cell-cycle commitment and G1/S transition. Scientific Reports, 12(1). https://doi.org/10.1038/s41598-022-20769-5
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Moore, A., Busch, M. P., Dziewulska, K., Francis, R. O., Hod, E. A., Zimring, J. C., D’Alessandro, A., & Page, G. P. (2022). Genome-wide metabolite quantitative trait loci analysis (mQTL) in red blood cells from volunteer blood donors. Journal of Biological Chemistry, 298(12), 102706. https://doi.org/10.1016/j.jbc.2022.102706
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Patel, T., Hammelman, J., Aziz, S., Jang, S., Closser, M., Michaels, T. L., Blum, J. A., Gifford, D. K., & Wichterle, H. (2022). Transcriptional dynamics of murine motor neuron maturation in vivo and in vitro. Nature Communications, 13(1). https://doi.org/10.1038/s41467-022-33022-4
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Orman, M., Landis, M., Oza, A., Nambiar, D., Gjeci, J., Song, K., Huang, V., Klestzick, A., Hachicho, C., Liu, S. Q., Kamm, J. M., Bartolini, F., Vadakkan, J. J., Rojas, C. M., & Vizcarra, C. L. (2022). Alterations to the broad-spectrum formin inhibitor SMIFH2 modulate potency but not specificity. Scientific Reports, 12(1). https://doi.org/10.1038/s41598-022-17685-z
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Jenny, L. A., Liu, P.-K., Kolesnikova, M., Duong, J., Kim, A. H., Levi, S. R., Greenstein, V. C., & Tsang, S. H. (2022). Foveolar thickness as potential standardized structural outcome measurement in studies of Bietti crystalline dystrophy. Scientific Reports, 12(1). https://doi.org/10.1038/s41598-022-16563-y
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Ganapathi, M., Buchovecky, C. M., Cristo, F., Ahimaz, P., Ruzal-Shapiro, C., Wou, K., Inácio, J. M., Iglesias, A., Belo, J. A., & Jobanputra, V. (2022). A novel biallelic loss-of-function variant inDAND5causes heterotaxy syndrome. Molecular Case Studies, 8(7), a006248. https://doi.org/10.1101/mcs.a006248
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Hickman, R. A., Faust, P. L., Marder, K., Yamamoto, A., & Vonsattel, J.-P. (2022). The distribution and density of Huntingtin inclusions across the Huntington disease neocortex: regional correlations with Huntingtin repeat expansion independent of pathologic grade. Acta Neuropathologica Communications, 10(1). https://doi.org/10.1186/s40478-022-01364-1
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Ganapathi, M., Thomas-Wilson, A., Buchovecky, C., Dharmadhikari, A., Barua, S., Lee, W., Ruan, M. Z. C., Soucy, M., Ragi, S., Tanaka, J., Clark, L. N., Naini, A. B., Liao, J., Mansukhani, M., Tsang, S., & Jobanputra, V. (2022). Clinical exome sequencing for inherited retinal degenerations at a tertiary care center. Scientific Reports, 12(1). https://doi.org/10.1038/s41598-022-13026-2
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Sidiropoulos, N., Daley, S. K., Briggs, M., Fernandes, H., Lockwood, C. M., Mahmoud, A. Z., Merker, J. D., Vasalos, P., Wielgos, L. M., Moncur, J. T., & Farkas, D. H. (2022). Most Frequently Cited Accreditation Inspection Deficiencies for Clinical Molecular Oncology Testing Laboratories and Opportunities for Improvement. Archives of Pathology & Laboratory Medicine, 146(12), 1441–1449. https://doi.org/10.5858/arpa.2021-0448-cp
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Avisar, H., Guardia-Laguarta, C., Surface, M., Papagiannakis, N., Maniati, M., Antonellou, R., Papadimitriou, D., Koros, C., Athanassiadou, A., Przedborski, S., Lerner, B., Stefanis, L., Area-Gomez, E., & Alcalay, R. N. (2022). Lipid level alteration in human and cellular models of alpha synuclein mutations. Npj Parkinson’s Disease, 8(1). https://doi.org/10.1038/s41531-022-00313-y
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Priemer, D. S., Rhodes, C. H., Karlovich, E., Perl, D. P., & Goldman, J. E. (2022). Aβ Deposits in the Neocortex of Adult and Infant Hypoxic Brains, Including in Cases of COVID-19. Journal of Neuropathology & Experimental Neurology, 81(12), 988–995. https://doi.org/10.1093/jnen/nlac095
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Barua, S., Pereira, E. M., Jobanputra, V., Anyane-Yeboa, K., Levy, B., & Liao, J. (2022). 3q27.1 microdeletion causes prenatal and postnatal growth restriction and neurodevelopmental abnormalities. Molecular Cytogenetics, 15(1). https://doi.org/10.1186/s13039-022-00587-0
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Kim, A. H., Liu, P.-K., Chang, Y.-H., Kang, E. Y.-C., Wang, H.-H., Chen, N., Tseng, Y.-J., Seo, G. H., Lee, H., Liu, L., Chao, A.-N., Chen, K.-J., Hwang, Y.-S., Wu, W.-C., Lai, C.-C., Tsang, S. H., Hsiao, M.-C., & Wang, N.-K. (2022). Congenital Stationary Night Blindness: Clinical and Genetic Features. International Journal of Molecular Sciences, 23(23), 14965. https://doi.org/10.3390/ijms232314965
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Sheng, J., Hod, E. A., Vlad, G., & Chavez, A. (2022). Quantifying protein abundance on single cells using split-pool sequencing on DNA-barcoded antibodies for diagnostic applications. Scientific Reports, 12(1). https://doi.org/10.1038/s41598-022-04842-7
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Chen, N., Lee, H., Kim, A. H., Liu, P.-K., Kang, E. Y.-C., Tseng, Y.-J., Seo, G. H., Khang, R., Liu, L., Chen, K.-J., Wu, W.-C., Hsiao, M.-C., & Wang, N.-K. (2022). Case report: novel PCDH15 variant causes usher syndrome type 1F with congenital hearing loss and syndromic retinitis pigmentosa. BMC Ophthalmology, 22(1). https://doi.org/10.1186/s12886-022-02659-6
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Winans, S., Yu, H. J., de los Santos, K., Wang, G. Z., KewalRamani, V. N., & Goff, S. P. (2022). A point mutation in HIV-1 integrase redirects proviral integration into centromeric repeats. Nature Communications, 13(1). https://doi.org/10.1038/s41467-022-29097-8
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Mucha, B., Qie, S., Bajpai, S., Tarallo, V., Diehl, J. N., Tedeschi, F., Zhou, G., Gao, Z., Flashner, S., Klein-Szanto, A. J., Hibshoosh, H., Masataka, S., Chajewski, O. S., Majsterek, I., Pytel, D., Hatzoglou, M., Der, C. J., Nakagawa, H., Bass, A. J., … Diehl, J. A. (2022). Tumor suppressor mediated ubiquitylation of hnRNPK is a barrier to oncogenic translation. Nature Communications, 13(1). https://doi.org/10.1038/s41467-022-34402-6
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Montenegro, D., Zhao, J., Kim, H. J., Shmarakov, I. O., Blaner, W. S., & Sparrow, J. R. (2022). Products of the visual cycle are detected in mice lacking retinol binding protein 4, the only known vitamin A carrier in plasma. Journal of Biological Chemistry, 298(12), 102722. https://doi.org/10.1016/j.jbc.2022.102722
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Park, J., Li, J., Mayer, J. P., Ball, K. A., Wu, J., Hall, C., Accili, D., Stowell, M. H. B., Bai, X., & Choi, E. (2022). Activation of the insulin receptor by an insulin mimetic peptide. Nature Communications, 13(1). https://doi.org/10.1038/s41467-022-33274-0
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Tanagala, K. K. K., Morin-Baxter, J., Carvajal, R., Cheema, M., Dubey, S., Nakagawa, H., Yoon, A., Cheng, Y.-S. L., Taylor, A., Nickerson, J., Mintz, A., & Momen-Heravi, F. (2022). SP140 inhibits STAT1 signaling, induces IFN-γ in tumor-associated macrophages, and is a predictive biomarker of immunotherapy response. Journal for ImmunoTherapy of Cancer, 10(12), e005088. https://doi.org/10.1136/jitc-2022-005088
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Paik, P. K., Luo, J., Ai, N., Kim, R., Ahn, L., Biswas, A., Coker, C., Ma, W., Wong, P., Buonocore, D. J., Lai, W. V., Chaft, J. E., Acharyya, S., Massagué, J., & Kris, M. G. (2022). Phase I trial of the TNF-α inhibitor certolizumab plus chemotherapy in stage IV lung adenocarcinomas. Nature Communications, 13(1). https://doi.org/10.1038/s41467-022-33719-6
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Luquez, T., Gaur, P., Kosater, I. M., Lam, M., Lee, D. I., Mares, J., Paryani, F., Yadav, A., & Menon, V. (2022). Cell type-specific changes identified by single-cell transcriptomics in Alzheimer’s disease. Genome Medicine, 14(1). https://doi.org/10.1186/s13073-022-01136-5
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Chen, L., Roake, C. M., Maccallini, P., Bavasso, F., Dehghannasiri, R., Santonicola, P., Mendoza-Ferreira, N., Scatolini, L., Rizzuti, L., Esposito, A., Gallotta, I., Francia, S., Cacchione, S., Galati, A., Palumbo, V., Kobin, M. A., Tartaglia, G. G., Colantoni, A., Proietti, G., … Raffa, G. D. (2022). TGS1 impacts snRNA 3′-end processing, ameliorates survival motor neuron-dependent neurological phenotypes in vivo and prevents neurodegeneration. Nucleic Acids Research, 50(21), 12400–12424. https://doi.org/10.1093/nar/gkac659
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de Leval, L., Alizadeh, A. A., Bergsagel, P. L., Campo, E., Davies, A., Dogan, A., Fitzgibbon, J., Horwitz, S. M., Melnick, A. M., Morice, W. G., Morin, R. D., Nadel, B., Pileri, S. A., Rosenquist, R., Rossi, D., Salaverria, I., Steidl, C., Treon, S. P., Zelenetz, A. D., … Scott, D. W. (2022). Genomic profiling for clinical decision making in lymphoid neoplasms. Blood, 140(21), 2193–2227. https://doi.org/10.1182/blood.2022015854
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