Epidemiology and Pathogenesis of Respiratory Viral Infections

Displaying 1 - 36 of 36CSV
Kuhn, A. J., Outlaw, V. K., Marcink, T. C., Yu, Z., Mears, M. C., Cajimat, M. N., Kreitler, D. F., Cleven, P. R., Mook, J. C., Bente, D. A., Porotto, M., Gellman, S. H., & Moscona, A. (2025). Enhancing the solubility of SARS-CoV-2 inhibitors to increase future prospects for clinical development. Journal of Virology. https://doi.org/10.1128/jvi.02159-24
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Smith-Jeffcoat, S. E., Benist, S., South, E., Oyegun, E. I., Bertumen, J. B., Grijalva, C. G., Zhu, Y., Scott, T. A., Schmitz, J., Chu, H. Y., Weil, A. A., Englund, J. A., MacMillan, M. P., Stockwell, M., McLaren, S. H., Sano, E., Vargas, C., Talbot, K., & Kirking, H. L. (2025). P-62. RSV Immunization Uptake and Barriers to Access Among Eligible Individuals During the First Season of Availability. Open Forum Infectious Diseases, 12(Supplement_1). https://doi.org/10.1093/ofid/ofae631.269
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Fulkerson, P. C., Lussier, S. J., Bendixsen, C. G., Castina, S. M., Gebretsadik, T., Marlin, J. S., Russell, P. B., Seibold, M. A., Everman, J. L., Moore, C. M., Snyder, B. M., Thompson, K., Tregoning, G. S., Wellford, S., Arbes, S. J., Bacharier, L. B., Calatroni, A., Camargo Jr, C. A., Dupont, W. D., … HEROS Study Team, on behalf of the. (2024). Human Epidemiology and Response to SARS-CoV-2 (HEROS): objectives, design, and enrollment results of a 12-city remote observational surveillance study of households with children, using direct-to-participant methods. American Journal of Epidemiology, 193(10), 1329–1338. https://doi.org/10.1093/aje/kwae077
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Fisher, L. H., Kee, J. J., Liu, A., Espinosa, C. M., Randhawa, A. K., Ludwig, J., Magaret, C. A., Robinson, S. T., Gilbert, P. B., Hyrien, O., Kublin, J. G., Rouphael, N., Falsey, A. R., Sobieszczyk, M. E., El Sahly, H. M., Grinsztejn, B., Gray, G. E., Kotloff, K. L., Gay, C. L., … Leathers, V. (2024). SARS-CoV-2 Viral Load in the Nasopharynx at Time of First Infection Among Unvaccinated Individuals. JAMA Network Open, 7(5), e2412835. https://doi.org/10.1001/jamanetworkopen.2024.12835
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McDonnell, J., Cousins, K., Younger, M. E. M., Lane, A., Abolhassani, H., Abraham, R. S., Al-Tamemi, S., Aldave-Becerra, J. C., Al-Faris, E. H., Alfaro-Murillo, A., AlKhater, S. A., Alsaati, N., Doss, A. M. A., Anderson, M., Angarola, E., Ariue, B., Arnold, D. E., Assa’ad, A. H., Aytekin, C., … Marsh, R. (2024). COVID-19 Vaccination in Patients with Inborn Errors of Immunity Reduces Hospitalization and Critical Care Needs Related to COVID-19: a USIDNET Report. Journal of Clinical Immunology, 44(4). https://doi.org/10.1007/s10875-023-01613-5
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Adams, K., Weber, Z. A., Yang, D.-H., Klein, N. P., DeSilva, M. B., Dascomb, K., Irving, S. A., Naleway, A. L., Rao, S., Gaglani, M., Flannery, B., Garg, S., Kharbanda, A. B., Grannis, S. J., Ong, T. C., Embi, P. J., Natarajan, K., Fireman, B., Zerbo, O., … Tenforde, M. W. (2023). Vaccine Effectiveness Against Pediatric Influenza-A–Associated Urgent Care, Emergency Department, and Hospital Encounters During the 2022–2023 Season: VISION Network. Clinical Infectious Diseases, 78(3), 746–755. https://doi.org/10.1093/cid/ciad704
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Belfer, J., Roskind, C. G., Grock, A., Jung, J., Bae, S. W., Zhao, L., & Sobolewski, B. (2024). Systematic online academic resource (SOAR) review: Pediatric respiratory infectious disease. AEM Education and Training, 8(1). Portico. https://doi.org/10.1002/aet2.10945
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van Boven, M., van Dorp, C. H., Westerhof, I., Jaddoe, V., Heuvelman, V., Duijts, L., Fourie, E., Sluiter-Post, J., van Houten, M. A., Badoux, P., Euser, S., Herpers, B., Eggink, D., de Hoog, M., Boom, T., Wildenbeest, J., Bont, L., Rozhnova, G., Bonten, M. J., … Bruijning-Verhagen, P. (2024). Estimation of introduction and transmission rates of SARS-CoV-2 in a prospective household study. PLOS Computational Biology, 20(1), e1011832. https://doi.org/10.1371/journal.pcbi.1011832
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Strizki, J. M., Gaspar, J. M., Howe, J. A., Hutchins, B., Mohri, H., Nair, M. S., Kinek, K. C., McKenna, P., Goh, S. L., & Murgolo, N. (2024). Molnupiravir maintains antiviral activity against SARS-CoV-2 variants and exhibits a high barrier to the development of resistance. Antimicrobial Agents and Chemotherapy, 68(1). https://doi.org/10.1128/aac.00953-23
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Columbia Affiliation
Germano, E. R., Flores, T., Freed, G. S., Kim, K., Tulinsky, G. H., Yang, A., Rose, O. J., Ray, C. A., Autry, A., Catallozzi, M., Mailloux, B. J., & Miranda, J. L. (2024). Building-level wastewater surveillance localizes interseasonal influenza variation. MSphere, 9(1). https://doi.org/10.1128/msphere.00600-23
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Tenforde, M. W., Weber, Z. A., Yang, D.-H., DeSilva, M. B., Dascomb, K., Irving, S. A., Naleway, A. L., Gaglani, M., Fireman, B., Lewis, N., Zerbo, O., Goddard, K., Timbol, J., Hansen, J. R., Grisel, N., Arndorfer, J., McEvoy, C. E., Essien, I. J., Rao, S., … Klein, N. P. (2023). Influenza Vaccine Effectiveness Against Influenza A–Associated Emergency Department, Urgent Care, and Hospitalization Encounters Among US Adults, 2022–2023. The Journal of Infectious Diseases, 230(1), 141–151. https://doi.org/10.1093/infdis/jiad542
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List, R., Solomon, G., Bichl, S., Horton, B. J., Shen, S., Corcoran, B., Sadeghi, H., Britto, M. T., Ren, C., & Albon, D. (2023). Improved recognition of lung function decline as signal of cystic fibrosis pulmonary exacerbation: a Cystic Fibrosis Learning Network Innovation Laboratory quality improvement initiative. BMJ Open Quality, 12(4), e002466. https://doi.org/10.1136/bmjoq-2023-002466
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Mellis, A., Smith-Jeffcoat, S. E., Petrie, J., Keipp Talbot, H., Morrissey, K. G., Stockwell, M., Maldonado, Y. A., Bowman, N. M., Lutrick, K., Rao, S., Salvatore, P. P., Biddle, J. E., Olivo, V., Battan-Wraith, S., Merrill, L. S., McLaren, S. H., Sano, E., Diaz, A., Sarnquist, C., … Grijalva, C. G. (2023). 2302. Transmissibility of SARS-CoV-2 by symptom: data from a case-ascertained household transmission study. Open Forum Infectious Diseases, 10(Supplement_2). https://doi.org/10.1093/ofid/ofad500.1924
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Mellis, A., Biddle, J. E., Antoon, J. W., McLaren, S. H., Belongia, E., Maldonado, Y. A., Bowman, N. M., Ellingson, K., Rao, S., Johnson, S., Stockwell, M., Sano, E., Silverio, R. A., Bullock, A., Yang, A., Haehnel, Q., McLean, H., Petrie, J., Sarnquist, C., … Rolfes, M. A. (2023). 925. Oseltamivir usage in community settings: data from a household transmission study. Open Forum Infectious Diseases, 10(Supplement_2). https://doi.org/10.1093/ofid/ofad500.970
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Tenforde, M. W., Weber, Z. A., DeSilva, M. B., Stenehjem, E., Yang, D.-H., Fireman, B., Gaglani, M., Kojima, N., Irving, S. A., Rao, S., Grannis, S. J., Naleway, A. L., Kirshner, L., Kharbanda, A. B., Dascomb, K., Lewis, N., Dalton, A. F., Ball, S. W., Natarajan, K., … Klein, N. P. (2023). Vaccine Effectiveness Against Influenza-Associated Urgent Care, Emergency Department, and Hospital Encounters During the 2021–2022 Season, VISION Network. The Journal of Infectious Diseases, 228(2), 185–195. https://doi.org/10.1093/infdis/jiad015
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Guzman, N. A., & Guzman, D. E. (2023). A COVID-19 Infection with Positive Sputum and Negative Nasopharyngeal/Oropharyngeal Rapid Antigen-Based Testing: A Case Report and Pilot Study. Medical & Clinical Case Reports Journal, 1(2), 77–84. https://doi.org/10.51219/mccrj/norberto-a-guzman/22
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Saiman, L., Coffin, S. E., Kociolek, L. K., Zerr, D. M., Milstone, A. M., Aldrich, M. L., Vargas, C. Y., Zapata, G., Zalot, M. A., Reyna, M. E., Adler, A., Voskertchian, A., Egbert, E. R., Alba, L., Gollerkeri, S., Ruggieri, M., Finelli, L., & Choi, Y. (2023). Healthcare-Associated Respiratory Syncytial Virus in Children’s Hospitals. Journal of the Pediatric Infectious Diseases Society, 12(5), 265–272. https://doi.org/10.1093/jpids/piad030
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Kaiser, K. A., Loffredo, L. F., Santos-Alexis, K. de los, Ringham, O. R., & Arpaia, N. (2022). Regulation of the alveolar regenerative niche by amphiregulin-producing regulatory T cells. Journal of Experimental Medicine, 220(3). https://doi.org/10.1084/jem.20221462
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Thind, P., Vargas, C. Y., Reed, C., Wang, L., Alba, L. R., Larson, E. L., Saiman, L., & Stockwell, M. S. (2023). Acceptability, Feasibility, and Validity of Detecting Respiratory Pathogens During Acute Respiratory Illness in Participant-Collected Swabs in a Low-Income, Community Sample. Open Forum Infectious Diseases, 10(3). https://doi.org/10.1093/ofid/ofad068
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Hill-Ricciuti, A., Walsh, E. E., Greendyke, W. G., Choi, Y., Barrett, A., Alba, L., Branche, A. R., Falsey, A. R., Phillips, M., Finelli, L., & Saiman, L. (2022). Clinical impact of healthcare-associated respiratory syncytial virus in hospitalized adults. Infection Control & Hospital Epidemiology, 44(3), 433–439. https://doi.org/10.1017/ice.2022.128
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Weidmann, M. D., Berry, G. J., Green, D. A., & Wu, F. (2022). Prevalence and Clinical Disease Severity of Respiratory Coinfections During the Coronavirus Disease 2019 Pandemic. Advances in Molecular Pathology, 5(1), 73–84. https://doi.org/10.1016/j.yamp.2022.07.003
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Motelow, J. E., Lippa, N. C., Hostyk, J., Feldman, E., Nelligan, M., Ren, Z., Alkelai, A., Milner, J. D., Gharavi, A. G., Tang, Y., Goldstein, D. B., & Kernie, S. G. (2022). Risk Variants in the Exomes of Children With Critical Illness. JAMA Network Open, 5(10), e2239122. https://doi.org/10.1001/jamanetworkopen.2022.39122
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Halabi, K. C., Stockwell, M. S., Alba, L., Vargas, C., Reed, C., & Saiman, L. (2022). Clinical and socioeconomic burden of rhinoviruses/enteroviruses in the community. Influenza and Other Respiratory Viruses, 16(5), 891–896. Portico. https://doi.org/10.1111/irv.12989
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Goldman, C. R., Sieling, W. D., Alba, L. R., Silverio Francisco, R. A., Vargas, C. Y., Barrett, A. E., Phillips, M., Finelli, L., & Saiman, L. (2021). Severe Clinical Outcomes Among Adults Hospitalized With Respiratory Syncytial Virus Infections, New York City, 2017-2019. Public Health Reports®, 137(5), 929–935. https://doi.org/10.1177/00333549211041545
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Wolf, J., Abzug, M. J., Anosike, B. I., Vora, S. B., Waghmare, A., Sue, P. K., Olivero, R. M., Oliveira, C. R., James, S. H., Morton, T. H., Maron, G. M., Young, J. L., Orscheln, R. C., Schwenk, H. T., Bio, L. L., Willis, Z. I., Lloyd, E. C., Hersh, A. L., Huskins, C. W., … Nakamura, M. M. (2022). Updated Guidance on Use and Prioritization of Monoclonal Antibody Therapy for Treatment of COVID-19 in Adolescents. Journal of the Pediatric Infectious Diseases Society, 11(5), 177–185. https://doi.org/10.1093/jpids/piab124
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Ko, E. R., Henao, R., Frankey, K., Petzold, E. A., Isner, P. D., Jaehne, A. K., Allen, N., Gardner-Gray, J., Hurst, G., Pflaum-Carlson, J., Jayaprakash, N., Rivers, E. P., Wang, H., Ugalde, I., Amanullah, S., Mercurio, L., Chun, T. H., May, L., Hickey, R. W., … Lautenbach, E. (2022). Prospective Validation of a Rapid Host Gene Expression Test to Discriminate Bacterial From Viral Respiratory Infection. JAMA Network Open, 5(4), e227299. https://doi.org/10.1001/jamanetworkopen.2022.7299
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Leiva-Juarez, M. M., Briganti, D. F., Urso, A., Russum, S., Benvenuto, L., Robbins, H., Shah, L., Costa, J., Gomez, E. A., Arcasoy, S., Sonett, J., & D’Ovidio, F. (2022). Large Airway Bronchial Wash Lipidomics as Novel Biomarkers for Chronic Lung Allograft Dysfunction. The Journal of Heart and Lung Transplantation, 41(4), S105. https://doi.org/10.1016/j.healun.2022.01.244
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Halabi, K. C., Saiman, L., & Zachariah, P. (2022). The Epidemiology of Respiratory Syncytial Virus in New York City during the Coronavirus Disease-2019 Pandemic Compared with Previous Years. The Journal of Pediatrics, 242, 242-244.e1. https://doi.org/10.1016/j.jpeds.2021.10.057
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Conway, J., Auerbach, S. R., Richmond, M. E., Sharp, B., Pahl, E., Feingold, B., Azeka, E., Dryer, W. J., Cantor, R. S., & Kirklin, J. K. (2022). Early report from the Pediatric Heart Transplant Society on COVID-19 infections in pediatric heart transplant candidates and recipients. The Journal of Heart and Lung Transplantation, 41(3), 327–333. https://doi.org/10.1016/j.healun.2021.11.003
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Muhlebach, M. S., Jiang, X., Kosorok, M. R., Klein, E. Y., & Saiman, L. (2022). Longitudinal changes and regional variation of incident infection rates at cystic fibrosis centers, United States 2010-2016. Journal of Cystic Fibrosis, 21(1), 34–39. https://doi.org/10.1016/j.jcf.2021.08.009
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Choi, Y., Hill‐Ricciuti, A., Branche, A. R., Sieling, W. D., Saiman, L., Walsh, E. E., Phillips, M., Falsey, A. R., & Finelli, L. (2021). Cost determinants among adults hospitalized with respiratory syncytial virus in the United States, 2017–2019. Influenza and Other Respiratory Viruses, 16(1), 151–158. Portico. https://doi.org/10.1111/irv.12912
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Kobat, M. A., Kivrak, T., Barua, P. D., Tuncer, T., Dogan, S., Tan, R.-S., Ciaccio, E. J., & Acharya, U. R. (2021). Automated COVID-19 and Heart Failure Detection Using DNA Pattern Technique with Cough Sounds. Diagnostics, 11(11), 1962. https://doi.org/10.3390/diagnostics11111962
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Bionghi, N., Dietz, D. E., Zucker, J., Zucker, J., Huang, S., Whittier, S., Green, D. A., Wu, F., Sobieszczyk, M., & Theodore, D. (2021). 351. Antibiotic Management Decisions and Use of a Multiplex PCR Panel for Pneumonia Diagnosis Among Critically Ill Patients with COVID-19. Open Forum Infectious Diseases, 8(Supplement_1), S280–S280. https://doi.org/10.1093/ofid/ofab466.552
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Nakayama, T., Lee, I. T., Jiang, S., Matter, M. S., Yan, C. H., Overdevest, J. B., Wu, C.-T., Goltsev, Y., Shih, L.-C., Liao, C.-K., Zhu, B., Bai, Y., Lidsky, P., Xiao, Y., Zarabanda, D., Yang, A., Easwaran, M., Schürch, C. M., Chu, P., … Nayak, J. V. (2021). Determinants of SARS-CoV-2 entry and replication in airway mucosal tissue and susceptibility in smokers. Cell Reports Medicine, 2(10), 100421. https://doi.org/10.1016/j.xcrm.2021.100421
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