Dharmadhikari, A. V., Abad, M. A., Khan, S., Maroofian, R., Sands, T. T., Ullah, F., Samejima, I., Shen, Y., Wear, M. A., Moore, K. E., Kondakova, E., Mitina, N., Schaub, T., Lee, G. K., Umandap, C. H., Berger, S. M., Iglesias, A. D., Popp, B., Abou Jamra, R., … Liao, J. (2025). RNA methyltransferase SPOUT1/CENP-32 links mitotic spindle organization with the neurodevelopmental disorder SpADMiSS. Nature Communications, 16(1). https://doi.org/10.1038/s41467-025-56876-w

Pedroni, A., Yilmaz, E., Del Vecchio, L., Bhattarai, P., Vidal, I. T., Dai, Y.-W. E., Koutsogiannis, K., Kizil, C., & Ampatzis, K. (2024). Decoding the molecular, cellular, and functional heterogeneity of zebrafish intracardiac nervous system. Nature Communications, 15(1). https://doi.org/10.1038/s41467-024-54830-w

Tayran, H., Yilmaz, E., Bhattarai, P., Min, Y., Wang, X., Ma, Y., Wang, N., Jeong, I., Nelson, N., Kassara, N., Cosacak, M. I., Dogru, R. M., Reyes-Dumeyer, D., Stenersen, J. M., Reddy, J. S., Qiao, M., Flaherty, D., Gunasekaran, T. I., Yang, Z., … Kizil, C. (2024). ABCA7-dependent induction of neuropeptide Y is required for synaptic resilience in Alzheimer’s disease through BDNF/NGFR signaling. Cell Genomics, 4(9), 100642. https://doi.org/10.1016/j.xgen.2024.100642

Elleman, A. V., Milicic, N., Williams, D. J., Simko, J., Liu, C. J., Haynes, A. L., Ehrlich, D. E., Makinson, C. D., & Du Bois, J. (2024). Behavioral control through the direct, focal silencing of neuronal activity. Cell Chemical Biology, 31(7), 1324-1335.e20. https://doi.org/10.1016/j.chembiol.2024.04.003

İş, Ö., Wang, X., Reddy, J. S., Min, Y., Yilmaz, E., Bhattarai, P., Patel, T., Bergman, J., Quicksall, Z., Heckman, M. G., Tutor-New, F. Q., Can Demirdogen, B., White, L., Koga, S., Krause, V., Inoue, Y., Kanekiyo, T., Cosacak, M. I., Nelson, N., … Ertekin-Taner, N. (2024). Gliovascular transcriptional perturbations in Alzheimer’s disease reveal molecular mechanisms of blood brain barrier dysfunction. Nature Communications, 15(1). https://doi.org/10.1038/s41467-024-48926-6

Rayamajhi, D., Ege, M., Ukhanov, K., Ringers, C., Zhang, Y., Jung, I., D’Gama, P. P., Li, S. S., Cosacak, M. I., Kizil, C., Park, H.-C., Yaksi, E., Martens, J. R., Brody, S. L., Jurisch-Yaksi, N., & Roy, S. (2024). The forkhead transcription factor Foxj1 controls vertebrate olfactory cilia biogenesis and sensory neuron differentiation. PLOS Biology, 22(1), e3002468. https://doi.org/10.1371/journal.pbio.3002468

Patterson, V., Ullah, F., Bryant, L., Li, D., Griffin, J. N., Sidhu, A., Saliganan, S., Blaile, M., Saenz, M. S., Smith, R., Ellingwood, S., Grange, D. K., Hu, X., Mireguli, M., Luo, Y., Shen, Y., Mulhern, M., Zackai, E., Ritter, A., … Bhoj, E. (2023). Abrogation of MAP4K4 protein function causes congenital anomalies in humans and zebrafish. Science Advances, 9(17). https://doi.org/10.1126/sciadv.ade0631

Schrauwen, I., Ghaffar, A., Bharadwaj, T., Shah, K., Rehman, S., Acharya, A., Liaqat, K., Lin, N. S., Everard, J. L., Khan, A., Ahmed, Z. M., Ahmad, W., Riazuddin, S., & Leal, S. M. (2022). Syntaxin 4 is essential for hearing in human and zebrafish. Human Molecular Genetics, 32(7), 1184–1192. https://doi.org/10.1093/hmg/ddac257

Xue, N., Liu, X., Zhang, D., Wu, Y., Zhong, Y., Wang, J., Fan, W., Jiang, H., Zhu, B., Ge, X., Gonzalez, R. V. L., Chen, L., Zhang, S., She, P., Zhong, Z., Sun, J., Chen, X., Wang, L., Gu, Z., … Zhang, X. (2023). Improving adenine and dual base editors through introduction of TadA-8e and Rad51DBD. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-36887-1

de Prisco, N., Ford, C., Elrod, N. D., Lee, W., Tang, L. C., Huang, K.-L., Lin, A., Ji, P., Jonnakuti, V. S., Boyle, L., Cabaj, M., Botta, S., Õunap, K., Reinson, K., Wojcik, M. H., Rosenfeld, J. A., Bi, W., Tveten, K., Prescott, T., … Gennarino, V. A. (2023). Alternative polyadenylation alters protein dosage by switching between intronic and 3′UTR sites. Science Advances, 9(7). https://doi.org/10.1126/sciadv.ade4814

Fabian, P., Tseng, K.-C., Thiruppathy, M., Arata, C., Chen, H.-J., Smeeton, J., Nelson, N., & Crump, J. G. (2022). Lifelong single-cell profiling of cranial neural crest diversification in zebrafish. Nature Communications, 13(1). https://doi.org/10.1038/s41467-021-27594-w

Bhattarai, P., Turgutalp, B., & Kizil, C. (2022). Zebrafish as an Experimental and Preclinical Model for Alzheimer’s Disease. ACS Chemical Neuroscience, 13(20), 2939–2941. https://doi.org/10.1021/acschemneuro.2c00583