Institute for Cancer Genetics

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McQuillan, N., Tazhibi, M., Wei, H.-J., Pouliopoulos, A., Bendau, E., Carrion, A. W., Berg, A., Kokossis, D., Zhang, X., Zhang, Z., Englander, Z., Yoh, N., Jan, C.-I., Gartrell, R. D., Garvin, J., Szalontay, L., Konofagou, E., Zacharoulis, S., & Wu, C.-C. (2022). MODL-25. Radiation and focused ultrasound–mediated blood–brain barrier opening for DMG: safety and feasibility of combinatorial therapy. Neuro-Oncology, 24(Supplement_1), i174–i174. https://doi.org/10.1093/neuonc/noac079.648
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Serra-Cardona, A., Duan, S., Yu, C., & Zhang, Z. (2022). H3K4me3 recognition by the COMPASS complex facilitates the restoration of this histone mark following DNA replication. Science Advances, 8(18). https://doi.org/10.1126/sciadv.abm6246
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Kang, T. Z. E., Wan, Y. C. E., Zhang, Z., & Chan, K. M. (2022). Lrwd1 impacts cell proliferation and the silencing of repetitive DNA elements. Genesis, 60(4–5). Portico. https://doi.org/10.1002/dvg.23475
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Mukherjee, S., Ali, A. M., Murty, V. V., & Raza, A. (2022). Mutation in SF3B1 gene promotes formation of polyploid giant cells in Leukemia cells. Medical Oncology, 39(6). https://doi.org/10.1007/s12032-022-01652-9
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Xia, Z., Kon, N., Gu, A. P., Tavana, O., & Gu, W. (2022). Deciphering the acetylation code of p53 in transcription regulation and tumor suppression. Oncogene, 41(22), 3039–3050. https://doi.org/10.1038/s41388-022-02331-9
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Lin, X., Jiang, W., Rudolph, J., Lee, B. J., Luger, K., & Zha, S. (2022). PARP inhibitors trap PARP2 and alter the mode of recruitment of PARP2 at DNA damage sites. Nucleic Acids Research, 50(7), 3958–3973. https://doi.org/10.1093/nar/gkac188
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Antoszewski, M., Fournier, N., Ruiz Buendía, G. A., Lourenco, J., Liu, Y., Sugrue, T., Dubey, C., Nkosi, M., Pritchard, C. E. J., Huijbers, I. J., Segat, G. C., Alonso-Moreno, S., Serracanta, E., Belver, L., Ferrando, A. A., Ciriello, G., Weng, A. P., Koch, U., & Radtke, F. (2022). Tcf1 is essential for initiation of oncogenic Notch1-driven chromatin topology in T-ALL. Blood, 139(16), 2483–2498. https://doi.org/10.1182/blood.2021012077
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Cortes, J. R., Filip, I., Albero, R., Patiño-Galindo, J. A., Quinn, S. A., Lin, W.-H. W., Laurent, A. P., Shih, B. B., Brown, J. A., Cooke, A. J., Mackey, A., Einson, J., Zairis, S., Rivas-Delgado, A., Laginestra, M. A., Pileri, S., Campo, E., Bhagat, G., Ferrando, A. A., … Palomero, T. (2022). Oncogenic Vav1-Myo1f induces therapeutically targetable macrophage-rich tumor microenvironment in peripheral T cell lymphoma. Cell Reports, 39(3), 110695. https://doi.org/10.1016/j.celrep.2022.110695
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Biswas, A. K., Han, S., Tai, Y., Ma, W., Coker, C., Quinn, S. A., Shakri, A. R., Zhong, T. J., Scholze, H., Lagos, G. G., Mela, A., Manova-Todorova, K., de Stanchina, E., Ferrando, A. A., Mendelsohn, C., Canoll, P., Yu, H. A., Paik, P. K., Saqi, A., … Acharyya, S. (2022). Targeting S100A9–ALDH1A1–Retinoic Acid Signaling to Suppress Brain Relapse inEGFR-Mutant Lung Cancer. Cancer Discovery, 12(4), 1002–1021. https://doi.org/10.1158/2159-8290.cd-21-0910
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Zhang, P., Gao, K., Zhang, L., Sun, H., Zhao, X., Liu, Y., Lv, Z., Shi, Q., Chen, Y., Jiao, D., Li, Y., Gu, W., & Wang, C. (2021). CRL2-KLHDC3 E3 ubiquitin ligase complex suppresses ferroptosis through promoting p14ARF degradation. Cell Death & Differentiation, 29(4), 758–771. https://doi.org/10.1038/s41418-021-00890-0
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Rashkovan, M., Albero, R., Gianni, F., Perez-Duran, P., Miller, H. I., Mackey, A. L., Paietta, E. M., Tallman, M. S., Rowe, J. M., Litzow, M. R., Wiernik, P. H., Luger, S., Sulis, M. L., Soni, R. K., & Ferrando, A. A. (2022). Intracellular Cholesterol Pools Regulate Oncogenic Signaling and Epigenetic Circuitries in Early T-cell Precursor Acute Lymphoblastic Leukemia. Cancer Discovery, 12(3), 856–871. https://doi.org/10.1158/2159-8290.cd-21-0551
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Evrin, C., Serra‐Cardona, A., Duan, S., Mukherjee, P. P., Zhang, Z., & Labib, K. P. M. (2022). Spt5 histone binding activity preserves chromatin during transcription by RNA polymerase II. The EMBO Journal, 41(5). Portico. https://doi.org/10.15252/embj.2021109783
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Menolfi, D., & Zha, S. (2021). Targeting BRCA-mutated tumors in mitosis. Nature Cancer, 2(12), 1296–1297. https://doi.org/10.1038/s43018-021-00293-7
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Vilarrasa-Blasi, R., Verdaguer-Dot, N., Belver, L., Soler-Vila, P., Beekman, R., Chapaprieta, V., Kulis, M., Queirós, A. C., Parra, M., Calasanz, M. J., Agirre, X., Prosper, F., Beà, S., Colomer, D., Marti-Renom, M. A., Ferrando, A., Campo, E., & Martin-Subero, J. I. (2021). Insights into the mechanisms underlying aberrant SOX11 oncogene expression in mantle cell lymphoma. Leukemia, 36(2), 583–587. https://doi.org/10.1038/s41375-021-01389-w
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Liu, Y., & Gu, W. (2022). p53 in ferroptosis regulation: the new weapon for the old guardian. Cell Death & Differentiation, 29(5), 895–910. https://doi.org/10.1038/s41418-022-00943-y
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Corinaldesi, C., Holmes, A. B., Shen, Q., Grunstein, E., Pasqualucci, L., Dalla-Favera, R., & Basso, K. (2022). Tracking Immunoglobulin Repertoire and Transcriptomic Changes in Germinal Center B Cells by Single-Cell Analysis. Frontiers in Immunology, 12. https://doi.org/10.3389/fimmu.2021.818758
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Menolfi, D., & Zha, S. (2022). DNA-PKcs kinase activity orchestrates both end-processing and end-ligation. Trends in Cell Biology, 32(2), 91–93. https://doi.org/10.1016/j.tcb.2021.12.002
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Chen, V., Bo, C., & Gu, W. (2021). The roads to ferroptosis under homeostatic versus pathological conditions. Molecular & Cellular Oncology, 8(5). https://doi.org/10.1080/23723556.2021.1970477
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van der Zwet, J. C. G., Buijs-Gladdines, J. G. C. A. M., Cordo', V., Debets, D. O., Smits, W. K., Chen, Z., Dylus, J., Zaman, G. J. R., Altelaar, M., Oshima, K., Bornhauser, B., Bourquin, J. P., Cools, J., Ferrando, A. A., Vormoor, J., Pieters, R., Vormoor, B., & Meijerink, J. P. P. (2021). MAPK-ERK is a central pathway in T-cell acute lymphoblastic leukemia that drives steroid resistance. Leukemia, 35(12), 3394–3405. https://doi.org/10.1038/s41375-021-01291-5

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Chen, A. X., Gartrell, R. D., Zhao, J., Upadhyayula, P. S., Zhao, W., Yuan, J., Minns, H. E., Dovas, A., Bruce, J. N., Lasorella, A., Iavarone, A., Canoll, P., Sims, P. A., & Rabadan, R. (2021). Single-cell characterization of macrophages in glioblastoma reveals MARCO as a mesenchymal pro-tumor marker. Genome Medicine, 13(1). https://doi.org/10.1186/s13073-021-00906-x
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Chen, D., Chu, B., Yang, X., Liu, Z., Jin, Y., Kon, N., Rabadan, R., Jiang, X., Stockwell, B. R., & Gu, W. (2021). iPLA2β-mediated lipid detoxification controls p53-driven ferroptosis independent of GPX4. Nature Communications, 12(1). https://doi.org/10.1038/s41467-021-23902-6
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Wojnarowicz, P. M., Escolano, M. G., Huang, Y.-H., Desai, B., Chin, Y., Shah, R., Xu, S., Yadav, S., Yaklichkin, S., Ouerfelli, O., Soni, R. K., Philip, J., Montrose, D. C., Healey, J. H., Rajasekhar, V. K., Garland, W. A., Ratiu, J., Zhuang, Y., Norton, L., … Benezra, R. (2021). Anti-tumor effects of an ID antagonist with no observed acquired resistance. Npj Breast Cancer, 7(1). https://doi.org/10.1038/s41523-021-00266-0
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Shaw, T. I., Dong, L., Tian, L., Qian, C., Liu, Y., Ju, B., High, A., Kavdia, K., Pagala, V. R., Shaner, B., Pei, D., Easton, J., Janke, L. J., Porter, S. N., Ma, X., Cheng, C., Pruett-Miller, S. M., Choi, J., Yu, J., … Zhang, J. (2021). Integrative network analysis reveals USP7 haploinsufficiency inhibits E-protein activity in pediatric T-lineage acute lymphoblastic leukemia (T-ALL). Scientific Reports, 11(1). https://doi.org/10.1038/s41598-021-84647-2
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Cortes, J. R., Patrone, C. C., Quinn, S. A., Gu, Y., Sanchez-Martin, M., Mackey, A., Cooke, A. J., Shih, B. B., Laurent, A. P., Trager, M. H., Ferrando, A. A., Geskin, L. J., & Palomero, T. (2021). Jak-STAT Inhibition Mediates Romidepsin and Mechlorethamine Synergism in Cutaneous T-Cell Lymphoma. Journal of Investigative Dermatology, 141(12), 2908-2920.e7. https://doi.org/10.1016/j.jid.2021.04.023
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Prakash, R., Sandoval, T., Morati, F., Zagelbaum, J. A., Lim, P.-X., White, T., Taylor, B., Wang, R., Desclos, E. C. B., Sullivan, M. R., Rein, H. L., Bernstein, K. A., Krawczyk, P. M., Gautier, J., Modesti, M., Vanoli, F., & Jasin, M. (2021). Distinct pathways of homologous recombination controlled by the SWS1–SWSAP1–SPIDR complex. Nature Communications, 12(1). https://doi.org/10.1038/s41467-021-24205-6
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