Chromatin

Displaying 1 - 20 of 20CSV
Kittle, R. H., & Levo, M. (2025). Exploring the interplay between enhancer–promoter interactions and transcription. Current Opinion in Genetics & Development, 90, 102303. https://doi.org/10.1016/j.gde.2024.102303
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Duan, S., Nodelman, I. M., Zhou, H., Tsukiyama, T., Bowman, G. D., & Zhang, Z. (2025). H3K56 acetylation regulates chromatin maturation following DNA replication. Nature Communications, 16(1). https://doi.org/10.1038/s41467-024-55144-7
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Gao, V. R., Yang, R., Das, A., Luo, R., Luo, H., McNally, D. R., Karagiannidis, I., Rivas, M. A., Wang, Z.-M., Barisic, D., Karbalayghareh, A., Wong, W., Zhan, Y. A., Chin, C. R., Noble, W. S., Bilmes, J. A., Apostolou, E., Kharas, M. G., Béguelin, W., … Leslie, C. S. (2024). ChromaFold predicts the 3D contact map from single-cell chromatin accessibility. Nature Communications, 15(1). https://doi.org/10.1038/s41467-024-53628-0
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Liebau, R. C., Waters, C., Ahmed, A., Soni, R. K., & Gautier, J. (2024). UVSSA facilitates transcription-coupled repair of DNA interstrand crosslinks. DNA Repair, 143, 103771. https://doi.org/10.1016/j.dnarep.2024.103771
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Daly, A. F., Dunnington, L. A., Rodriguez-Buritica, D. F., Spiegel, E., Brancati, F., Mantovani, G., Rawal, V. M., Faucz, F. R., Hijazi, H., Caberg, J.-H., Nardone, A. M., Bengala, M., Fortugno, P., Del Sindaco, G., Ragonese, M., Gould, H., Cannavò, S., Pétrossians, P., Lania, A., … Franke, M. (2024). Chromatin conformation capture in the clinic: 4C-seq/HiC distinguishes pathogenic from neutral duplications at the GPR101 locus. Genome Medicine, 16(1). https://doi.org/10.1186/s13073-024-01378-5
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Xiao, M., Kondo, S., Nomura, M., Kato, S., Nishimura, K., Zang, W., Zhang, Y., Akashi, T., Viny, A., Shigehiro, T., Ikawa, T., Yamazaki, H., Fukumoto, M., Tanaka, A., Hayashi, Y., Koike, Y., Aoyama, Y., Ito, H., Nishikawa, H., … Inoue, D. (2023). BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state. Nature Communications, 14(1). https://doi.org/10.1038/s41467-023-44081-6
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Momeni-Boroujeni, A., Vanderbilt, C., Yousefi, E., Abu-Rustum, N. R., Aghajanian, C., Soslow, R. A., Ellenson, L. H., Weigelt, B., & Murali, R. (2023). Landscape of chromatin remodeling gene alterations in endometrial carcinoma. Gynecologic Oncology, 172, 54–64. https://doi.org/10.1016/j.ygyno.2023.03.010
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Zhang, D., Deng, Y., Kukanja, P., Agirre, E., Bartosovic, M., Dong, M., Ma, C., Ma, S., Su, G., Bao, S., Liu, Y., Xiao, Y., Rosoklija, G. B., Dwork, A. J., Mann, J. J., Leong, K. W., Boldrini, M., Wang, L., Haeussler, M., … Fan, R. (2023). Spatial epigenome–transcriptome co-profiling of mammalian tissues. Nature, 616(7955), 113–122. https://doi.org/10.1038/s41586-023-05795-1
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Du, W., Shi, G., Shan, C.-M., Li, Z., Zhu, B., Jia, S., Li, Q., & Zhang, Z. (2022). Mechanisms of chromatin-based epigenetic inheritance. Science China Life Sciences, 65(11), 2162–2190. https://doi.org/10.1007/s11427-022-2120-1
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Malik, V., Zang, R., Fuentes-Iglesias, A., Huang, X., Li, D., Fidalgo, M., Zhou, H., & Wang, J. (2022). Comparative functional genomics identifies unique molecular features of EPSCs. Life Science Alliance, 5(11), e202201608. https://doi.org/10.26508/lsa.202201608
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Deng, Y., Bartosovic, M., Ma, S., Zhang, D., Kukanja, P., Xiao, Y., Su, G., Liu, Y., Qin, X., Rosoklija, G. B., Dwork, A. J., Mann, J. J., Xu, M. L., Halene, S., Craft, J. E., Leong, K. W., Boldrini, M., Castelo-Branco, G., & Fan, R. (2022). Spatial profiling of chromatin accessibility in mouse and human tissues. Nature, 609(7926), 375–383. https://doi.org/10.1038/s41586-022-05094-1
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Chen, H., Hu, B., Horth, C., Bareke, E., Rosenbaum, P., Kwon, S. Y., Sirois, J., Weinberg, D. N., Robison, F. M., Garcia, B. A., Lu, C., Pastor, W. A., & Majewski, J. (2022). H3K36 dimethylation shapes the epigenetic interaction landscape by directing repressive chromatin modifications in embryonic stem cells. Genome Research. https://doi.org/10.1101/gr.276383.121
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Evrin, C., Serra‐Cardona, A., Duan, S., Mukherjee, P. P., Zhang, Z., & Labib, K. P. M. (2022). Spt5 histone binding activity preserves chromatin during transcription by RNA polymerase II. The EMBO Journal, 41(5). Portico. https://doi.org/10.15252/embj.2021109783
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Martinez-Pastor, B., Silveira, G. G., Clarke, T. L., Chung, D., Gu, Y., Cosentino, C., Davidow, L. S., Mata, G., Hassanieh, S., Salsman, J., Ciccia, A., Bae, N., Bedford, M. T., Megias, D., Rubin, L. L., Efeyan, A., Dellaire, G., & Mostoslavsky, R. (2021). Assessing kinetics and recruitment of DNA repair factors using high content screens. Cell Reports, 37(13), 110176. https://doi.org/10.1016/j.celrep.2021.110176
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