Bradford Bertumen, J., Benist, S., South, E., Ivy Oyegun, E., Smith-Jeffcoat, S. E., Grijalva, C. G., Zhu, Y., Scott, T. A., Schmitz, J., Chu, H. Y., Weil, A. A., Englund, J. A., MacMillan, M. P., Stockwell, M., McLaren, S. H., Sano, E., Vargas, C., Talbot, K., & Kirking, H. L. (2025). P-2071. 2023-2024 COVID-19 Vaccine Uptake, Knowledge, and Attitudes among Individuals enrolled in a Household Transmission Study, Tennessee, New York, and Washington, January-April 2024. Open Forum Infectious Diseases, 12(Supplement_1). https://doi.org/10.1093/ofid/ofae631.2227

Chan, L. Y. H., Morris, S. E., Stockwell, M. S., Bowman, N. M., Asturias, E., Rao, S., Lutrick, K., Ellingson, K. D., Nguyen, H. Q., Maldonado, Y., McLaren, S. H., Sano, E., Biddle, J. E., Smith-Jeffcoat, S. E., Biggerstaff, M., Rolfes, M. A., Talbot, H. K., Grijalva, C. G., Borchering, R. K., & Mellis, A. M. (2025). Estimating the generation time for influenza transmission using household data in the United States. Epidemics, 50, 100815. https://doi.org/10.1016/j.epidem.2025.100815

Bidari, S., & Yang, W. (2024). The impact of household size on measles transmission: A long-term perspective. Epidemics, 49, 100791. https://doi.org/10.1016/j.epidem.2024.100791

Saad-Roy, C. M., Morris, S. E., Boots, M., Baker, R. E., Lewis, B. L., Farrar, J., Marathe, M. V., Graham, A. L., Levin, S. A., Wagner, C. E., Metcalf, C. J. E., & Grenfell, B. T. (2024). Impact of waning immunity against SARS-CoV-2 severity exacerbated by vaccine hesitancy. PLOS Computational Biology, 20(8), e1012211. https://doi.org/10.1371/journal.pcbi.1012211

Yang, W., & Shaman, J. (2024). Reconciling the efficacy and effectiveness of masking on epidemic outcomes. Journal of The Royal Society Interface, 21(212). https://doi.org/10.1098/rsif.2023.0666

Griggs, E. P., Mitchell, P. K., Lazariu, V., Gaglani, M., McEvoy, C., Klein, N. P., Valvi, N. R., Irving, S. A., Kojima, N., Stenehjem, E., Crane, B., Rao, S., Grannis, S. J., Embi, P. J., Kharbanda, A. B., Ong, T. C., Natarajan, K., Dascomb, K., Naleway, A. L., … Tenforde, M. W. (2023). Clinical Epidemiology and Risk Factors for Critical Outcomes Among Vaccinated and Unvaccinated Adults Hospitalized With COVID-19—VISION Network, 10 States, June 2021–March 2023. Clinical Infectious Diseases, 78(2), 338–348. https://doi.org/10.1093/cid/ciad505

van Boven, M., van Dorp, C. H., Westerhof, I., Jaddoe, V., Heuvelman, V., Duijts, L., Fourie, E., Sluiter-Post, J., van Houten, M. A., Badoux, P., Euser, S., Herpers, B., Eggink, D., de Hoog, M., Boom, T., Wildenbeest, J., Bont, L., Rozhnova, G., Bonten, M. J., … Bruijning-Verhagen, P. (2024). Estimation of introduction and transmission rates of SARS-CoV-2 in a prospective household study. PLOS Computational Biology, 20(1), e1011832. https://doi.org/10.1371/journal.pcbi.1011832

Ramlall, V., Gisladottir, U., Kefeli, J., Tanaka, Y., May, B., & Tatonetti, N. (2023). Using machine learning probabilities to identify effects of COVID-19. Patterns, 4(12), 100889. https://doi.org/10.1016/j.patter.2023.100889

Paintsil, E., Alimi, Y., Abdulaziz, M., Ogbuagu, O., Ogunsola, F., Kessy, S. J., Horsney, E., Lee, C., Brundney, K., Okwor, T., Kabwe, P., Waheed, A., Vondran, A., Bigirimana, R., Ilesanmi, O., Nsubuga, D. N., Raji, T., Mankoula, W., Ihekweazu, C., & Nkengasong, J. (2023). A continent-wide effort and solidarity at curbing COVID-19 pandemic: the Africa task force for novel coronavirus (AFTCOR) infection prevention and control technical working group’s experience. BMC Public Health, 23(1). https://doi.org/10.1186/s12889-023-15706-8

Goodman, S. H., Mellis, A., Grijalva, C. G., Keipp Talbot, H., Stockwell, M., McLaren, S. H., Sano, E., Rao, S., Asturias, E. J., McLean, H., Belongia, E., Govindaranjan, P., Sarnquist, C., Maldonado, Y. A., Ellingson, K., Lutrick, K., Bowman, N. M., Smith-Jeffcoat, S. E., Rolfes, M. A., … Lin, J. T. (2023). 2293. Examining social vulnerability and its effect on COVID-19 transmission in households. Open Forum Infectious Diseases, 10(Supplement_2). https://doi.org/10.1093/ofid/ofad500.1915

Saad-Roy, C. M., Morris, S. E., Baker, R. E., Farrar, J., Graham, A. L., Levin, S. A., Wagner, C. E., Metcalf, C. Jessica. E., & Grenfell, B. T. (2023). Medium-term scenarios of COVID-19 as a function of immune uncertainties and chronic disease. Journal of The Royal Society Interface, 20(205). https://doi.org/10.1098/rsif.2023.0247

Yang, W., & Shaman, J. (2023). Development of Accurate Long-lead COVID-19 Forecast. PLOS Computational Biology, 19(7), e1011278. https://doi.org/10.1371/journal.pcbi.1011278

Tenforde, M. W., Weber, Z. A., DeSilva, M. B., Stenehjem, E., Yang, D.-H., Fireman, B., Gaglani, M., Kojima, N., Irving, S. A., Rao, S., Grannis, S. J., Naleway, A. L., Kirshner, L., Kharbanda, A. B., Dascomb, K., Lewis, N., Dalton, A. F., Ball, S. W., Natarajan, K., … Klein, N. P. (2023). Vaccine Effectiveness Against Influenza-Associated Urgent Care, Emergency Department, and Hospital Encounters During the 2021–2022 Season, VISION Network. The Journal of Infectious Diseases, 228(2), 185–195. https://doi.org/10.1093/infdis/jiad015

Sania, A., Mahmud, A. S., Alschuler, D. M., Urmi, T., Chowdhury, S., Lee, S., Mostari, S., Shaikh, F. Z., Sojib, K. H., Khan, T., Khan, Y., Chowdhury, A., & Arifeen, S. el. (2023). Risk factors for COVID-19 mortality among telehealth patients in Bangladesh: A prospective cohort study. PLOS Global Public Health, 3(6), e0001971. https://doi.org/10.1371/journal.pgph.0001971

Dalton, A. F., Weber, Z. A., Allen, K. S., Stenehjem, E., Irving, S. A., Spark, T. L., Adams, K., Zerbo, O., Lazariu, V., Dixon, B. E., Dascomb, K., Hartmann, E., Kharbanda, A. B., Ong, T. C., DeSilva, M. B., Beaton, M., Gaglani, M., Patel, P., Naleway, A. L., … Tenforde, M. W. (2023). Relationships Between Social Vulnerability and Coronavirus Disease 2019 Vaccination Coverage and Vaccine Effectiveness. Clinical Infectious Diseases, 76(9), 1615–1625. https://doi.org/10.1093/cid/ciad003

Dawood, F. S., Couture, A., Zhang, X., Stockwell, M. S., Porucznik, C. A., Stanford, J. B., Hetrich, M., Veguilla, V., Thornburg, N., Heaney, C. D., Wang, J., Duque, J., Jeddy, Z., Deloria Knoll, M., & Karron, R. (2023). Severe Acute Respiratory Syndrome Coronavirus 2 Neutralizing Antibody Responses After Community Infections in Children and Adults. Open Forum Infectious Diseases, 10(5). https://doi.org/10.1093/ofid/ofad168

Ranard, B. L., Vodovotz, Y., Asgari, S., Megjhani, M., Chow, C. C., & Park, S. (2023). Mathematical model of SARS-CoV-2 immunity predicts Paxlovid rebound. Journal of Critical Care, 74, 154210. https://doi.org/10.1016/j.jcrc.2022.154210

Harris, J. N., Mauro, C., Andresen, J. A., Zimet, G. D., & Rosenthal, S. L. (2022). COVID-19 vaccine uptake and attitudes towards mandates in a nationally representative U.S. sample. Journal of Behavioral Medicine, 46(1–2), 25–39. https://doi.org/10.1007/s10865-022-00317-2

Thind, P., Vargas, C. Y., Reed, C., Wang, L., Alba, L. R., Larson, E. L., Saiman, L., & Stockwell, M. S. (2023). Acceptability, Feasibility, and Validity of Detecting Respiratory Pathogens During Acute Respiratory Illness in Participant-Collected Swabs in a Low-Income, Community Sample. Open Forum Infectious Diseases, 10(3). https://doi.org/10.1093/ofid/ofad068

Pablos-Méndez, A., Villa, S., Monti, M. C., Raviglione, M. C., Tabish, H. B., Evans, T. G., & Cash, R. A. (2022). Global ecological analysis of COVID-19 mortality and comparison between “the East” and “the West.” Scientific Reports, 12(1). https://doi.org/10.1038/s41598-022-09286-7

Weidmann, M. D., Berry, G. J., Green, D. A., & Wu, F. (2022). Prevalence and Clinical Disease Severity of Respiratory Coinfections During the Coronavirus Disease 2019 Pandemic. Advances in Molecular Pathology, 5(1), 73–84. https://doi.org/10.1016/j.yamp.2022.07.003

Pinheiro, J. R., dos Reis, E. C., Farias, J. P., Fogaça, M. M. C., da Silva, P. de S., Santana, I. V. R., Rocha, A. L. S., Vidal, P. O., Simões, R. da C., Luiz, W. B., Birbrair, A., de Aguiar, R. S., de Souza, R. P., Azevedo, V. A. de C., Chaves, G., Belmok, A., Durães-Carvalho, R., Melo, F. L., Ribeiro, B. M., & Amorim, J. H. (2022). Impact of Early Pandemic SARS-CoV-2 Lineages Replacement with the Variant of Concern P.1 (Gamma) in Western Bahia, Brazil. Viruses, 14(10), 2314. https://doi.org/10.3390/v14102314

Kuznetsova, L., Diago-Navarro, E., Mathu, R., & Trilla, A. (2022). Effectiveness of COVID-19 Vaccination Mandates and Incentives in Europe. Vaccines, 10(10), 1714. https://doi.org/10.3390/vaccines10101714

Gkioulekas, E., McCullough, P. A., & Zelenko, V. (2022). Statistical Analysis Methods Applied to Early Outpatient COVID-19 Treatment Case Series Data. COVID, 2(8), 1139–1182. https://doi.org/10.3390/covid2080084

Ostropolets, A., & Hripcsak, G. (2022). COVID-19 vaccination effectiveness rates by week and sources of bias: a retrospective cohort study. BMJ Open, 12(8), e061126. https://doi.org/10.1136/bmjopen-2022-061126

Sumner, K. M., Karron, R. A., Stockwell, M. S., Dawood, F. S., Stanford, J. B., Mellis, A., Hacker, E., Thind, P., Castro, M. J. E., Harris, J. P., Deloria Knoll, M., Schappell, E., Hetrich, M. K., Duque, J., Jeddy, Z., Altunkaynak, K., Poe, B., Meece, J., Stefanski, E., … Woods, S. (2022). Impact of Age and Symptom Development on SARS-CoV-2 Transmission in Households With Children—Maryland, New York, and Utah, August 2020–October 2021. Open Forum Infectious Diseases, 9(8). https://doi.org/10.1093/ofid/ofac390

Diaz, D., Chacko, S., Sperling, A., Fleck, E., Louh, I., Trepp, R., & Ye, S. (2022). Assessment of Digital and Community-Based Outreach Interventions to Encourage COVID-19 Vaccination Uptake in an Underserved Community. JAMA Network Open, 5(6), e2217875. https://doi.org/10.1001/jamanetworkopen.2022.17875