Metabolic Engineering and Synthetic Biology

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Swain, A. C., Borghans, J. A. M., & de Boer, R. J. (2025). How are estimated cellular turnover rates influenced by the dynamics of a source population? PLOS Computational Biology, 21(5), e1013052. https://doi.org/10.1371/journal.pcbi.1013052
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Zhao, H., Petrey, D., Murray, D., & Honig, B. (2024). ZEPPI: Proteome-scale sequence-based evaluation of protein–protein interaction models. Proceedings of the National Academy of Sciences, 121(21). https://doi.org/10.1073/pnas.2400260121
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Petrey, D., Zhao, H., Trudeau, S. J., Murray, D., & Honig, B. (2023). PrePPI: A Structure Informed Proteome-wide Database of Protein–Protein Interactions. Journal of Molecular Biology, 435(14), 168052. https://doi.org/10.1016/j.jmb.2023.168052
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